Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CTGFP29279 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTGFP29279 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.65■■□□□ 1.06
CTGFP29279 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CTGFP29279 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CTGFP29279 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.65■■□□□ 1.06
CTGFP29279 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CTGFP29279 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CTGFP29279 AC104417.2-201ENST00000562989 1793 ntBASIC21.64■■□□□ 1.06
CTGFP29279 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.64■■□□□ 1.05
CTGFP29279 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTGFP29279 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CTGFP29279 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CTGFP29279 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.64■■□□□ 1.05
CTGFP29279 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.64■■□□□ 1.05
CTGFP29279 AC012615.1-201ENST00000565797 1299 ntBASIC21.64■■□□□ 1.05
CTGFP29279 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.64■■□□□ 1.05
CTGFP29279 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.64■■□□□ 1.05
CTGFP29279 AC139530.3-201ENST00000620344 690 ntBASIC21.64■■□□□ 1.05
CTGFP29279 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.64■■□□□ 1.05
CTGFP29279 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTGFP29279 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTGFP29279 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CTGFP29279 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTGFP29279 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTGFP29279 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CTGFP29279 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CTGFP29279 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTGFP29279 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CTGFP29279 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC21.63■■□□□ 1.05
CTGFP29279 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.63■■□□□ 1.05
CTGFP29279 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.63■■□□□ 1.05
CTGFP29279 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CTGFP29279 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CTGFP29279 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CTGFP29279 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTGFP29279 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.63■■□□□ 1.05
CTGFP29279 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTGFP29279 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.62■■□□□ 1.05
CTGFP29279 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CTGFP29279 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.62■■□□□ 1.05
CTGFP29279 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CTGFP29279 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.62■■□□□ 1.05
CTGFP29279 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTGFP29279 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTGFP29279 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTGFP29279 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
CTGFP29279 AP005212.1-201ENST00000581547 1997 ntBASIC21.62■■□□□ 1.05
CTGFP29279 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CTGFP29279 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.62■■□□□ 1.05
CTGFP29279 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CTGFP29279 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.62■■□□□ 1.05
CTGFP29279 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.62■■□□□ 1.05
CTGFP29279 AL121912.1-201ENST00000603683 238 ntBASIC21.62■■□□□ 1.05
CTGFP29279 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.62■■□□□ 1.05
CTGFP29279 NME4-212ENST00000621774 904 ntTSL 3 BASIC21.62■■□□□ 1.05
CTGFP29279 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTGFP29279 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTGFP29279 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTGFP29279 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CTGFP29279 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTGFP29279 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.61■■□□□ 1.05
CTGFP29279 AC009237.14-201ENST00000609975 1594 ntBASIC21.61■■□□□ 1.05
CTGFP29279 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTGFP29279 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CTGFP29279 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTGFP29279 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTGFP29279 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTGFP29279 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CTGFP29279 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTGFP29279 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21.61■■□□□ 1.05
CTGFP29279 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTGFP29279 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.61■■□□□ 1.05
CTGFP29279 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.61■■□□□ 1.05
CTGFP29279 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.61■■□□□ 1.05
CTGFP29279 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC21.61■■□□□ 1.05
CTGFP29279 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21.61■■□□□ 1.05
CTGFP29279 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC21.61■■□□□ 1.05
CTGFP29279 AC120114.3-201ENST00000611923 658 ntBASIC21.61■■□□□ 1.05
CTGFP29279 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.61■■□□□ 1.05
CTGFP29279 AC133561.1-201ENST00000568600 2415 ntBASIC21.61■■□□□ 1.05
CTGFP29279 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CTGFP29279 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTGFP29279 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTGFP29279 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTGFP29279 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTGFP29279 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CTGFP29279 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.6■■□□□ 1.05
CTGFP29279 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CTGFP29279 AKR1C7P-201ENST00000305623 895 ntBASIC21.6■■□□□ 1.05
CTGFP29279 TEX30-205ENST00000376029 959 ntTSL 2 BASIC21.6■■□□□ 1.05
CTGFP29279 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.6■■□□□ 1.05
CTGFP29279 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CTGFP29279 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTGFP29279 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.6■■□□□ 1.05
CTGFP29279 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTGFP29279 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTGFP29279 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CTGFP29279 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTGFP29279 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms