Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.17■□□□□ 0.82
MMP8P22894 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.17■□□□□ 0.82
MMP8P22894 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MMP8P22894 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
MMP8P22894 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP8P22894 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP8P22894 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
MMP8P22894 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP8P22894 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MMP8P22894 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.16■□□□□ 0.82
MMP8P22894 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.16■□□□□ 0.82
MMP8P22894 CROCCP3-202ENST00000420820 1947 ntBASIC20.16■□□□□ 0.82
MMP8P22894 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MMP8P22894 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
MMP8P22894 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MMP8P22894 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP8P22894 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
MMP8P22894 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.16■□□□□ 0.82
MMP8P22894 AC026271.3-201ENST00000571884 352 ntBASIC20.16■□□□□ 0.82
MMP8P22894 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP8P22894 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
MMP8P22894 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MMP8P22894 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.16■□□□□ 0.82
MMP8P22894 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP8P22894 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP8P22894 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP8P22894 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
MMP8P22894 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MMP8P22894 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MMP8P22894 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MMP8P22894 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.15■□□□□ 0.82
MMP8P22894 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.15■□□□□ 0.82
MMP8P22894 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.15■□□□□ 0.82
MMP8P22894 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.15■□□□□ 0.82
MMP8P22894 CR392000.1-201ENST00000624770 1228 ntBASIC20.15■□□□□ 0.82
MMP8P22894 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
MMP8P22894 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MMP8P22894 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MMP8P22894 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MMP8P22894 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
MMP8P22894 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
MMP8P22894 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MMP8P22894 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MMP8P22894 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.14■□□□□ 0.82
MMP8P22894 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MMP8P22894 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
MMP8P22894 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MMP8P22894 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
MMP8P22894 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MMP8P22894 RCC2P6-201ENST00000526625 1557 ntBASIC20.14■□□□□ 0.81
MMP8P22894 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP8P22894 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
MMP8P22894 AL135905.2-201ENST00000584934 1404 ntBASIC20.14■□□□□ 0.81
MMP8P22894 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
MMP8P22894 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP8P22894 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
MMP8P22894 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
MMP8P22894 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
MMP8P22894 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP8P22894 AL158047.1-201ENST00000445918 881 ntBASIC20.14■□□□□ 0.81
MMP8P22894 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.14■□□□□ 0.81
MMP8P22894 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.14■□□□□ 0.81
MMP8P22894 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.14■□□□□ 0.81
MMP8P22894 AL031985.4-201ENST00000642138 673 ntBASIC20.14■□□□□ 0.81
MMP8P22894 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MMP8P22894 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP8P22894 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.14■□□□□ 0.81
MMP8P22894 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP8P22894 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.14■□□□□ 0.81
MMP8P22894 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
MMP8P22894 KRT8P11-201ENST00000409686 1436 ntBASIC20.13■□□□□ 0.81
MMP8P22894 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
MMP8P22894 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MMP8P22894 AL020996.1-203ENST00000536896 2307 ntBASIC20.13■□□□□ 0.81
MMP8P22894 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
MMP8P22894 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
MMP8P22894 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MMP8P22894 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.13■□□□□ 0.81
MMP8P22894 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.13■□□□□ 0.81
MMP8P22894 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
MMP8P22894 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.13■□□□□ 0.81
MMP8P22894 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.13■□□□□ 0.81
MMP8P22894 UBE2SP1-201ENST00000450587 669 ntBASIC20.13■□□□□ 0.81
MMP8P22894 AC091390.4-202ENST00000476426 537 ntBASIC20.13■□□□□ 0.81
MMP8P22894 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
MMP8P22894 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
MMP8P22894 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
MMP8P22894 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.13■□□□□ 0.81
MMP8P22894 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.13■□□□□ 0.81
MMP8P22894 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MMP8P22894 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
MMP8P22894 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
MMP8P22894 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
MMP8P22894 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
MMP8P22894 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.13■□□□□ 0.81
MMP8P22894 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MMP8P22894 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
MMP8P22894 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.13■□□□□ 0.81
MMP8P22894 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.13■□□□□ 0.81
MMP8P22894 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms