Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NR4A1P22736 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NR4A1P22736 WIZP1-201ENST00000531444 2299 ntBASIC17.74■□□□□ 0.43
NR4A1P22736 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NR4A1P22736 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NR4A1P22736 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.74■□□□□ 0.43
NR4A1P22736 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.74■□□□□ 0.43
NR4A1P22736 AC090164.3-201ENST00000610780 2143 ntBASIC17.74■□□□□ 0.43
NR4A1P22736 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NR4A1P22736 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NR4A1P22736 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NR4A1P22736 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NR4A1P22736 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NR4A1P22736 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.74■□□□□ 0.43
NR4A1P22736 MIPEPP3-201ENST00000412105 444 ntBASIC17.74■□□□□ 0.43
NR4A1P22736 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
NR4A1P22736 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.74■□□□□ 0.43
NR4A1P22736 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.74■□□□□ 0.43
NR4A1P22736 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.74■□□□□ 0.43
NR4A1P22736 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.74■□□□□ 0.43
NR4A1P22736 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NR4A1P22736 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NR4A1P22736 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.74■□□□□ 0.43
NR4A1P22736 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NR4A1P22736 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.74■□□□□ 0.43
NR4A1P22736 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NR4A1P22736 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NR4A1P22736 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR4A1P22736 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR4A1P22736 AC006333.2-201ENST00000607957 2099 ntBASIC17.73■□□□□ 0.43
NR4A1P22736 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR4A1P22736 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR4A1P22736 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR4A1P22736 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR4A1P22736 NOC2LP2-201ENST00000407594 1944 ntBASIC17.73■□□□□ 0.43
NR4A1P22736 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR4A1P22736 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR4A1P22736 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NR4A1P22736 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.73■□□□□ 0.43
NR4A1P22736 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.73■□□□□ 0.43
NR4A1P22736 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
NR4A1P22736 MCRIP2P1-201ENST00000394346 511 ntBASIC17.73■□□□□ 0.43
NR4A1P22736 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NR4A1P22736 BX276092.2-201ENST00000417668 665 ntBASIC17.73■□□□□ 0.43
NR4A1P22736 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.73■□□□□ 0.43
NR4A1P22736 AL138781.1-201ENST00000566567 1274 ntBASIC17.73■□□□□ 0.43
NR4A1P22736 MIR4758-201ENST00000577688 71 ntBASIC17.73■□□□□ 0.43
NR4A1P22736 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
NR4A1P22736 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NR4A1P22736 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR4A1P22736 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.73■□□□□ 0.43
NR4A1P22736 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR4A1P22736 AC067852.2-201ENST00000590513 2313 ntBASIC17.73■□□□□ 0.43
NR4A1P22736 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR4A1P22736 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR4A1P22736 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
NR4A1P22736 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.73■□□□□ 0.43
NR4A1P22736 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.73■□□□□ 0.43
NR4A1P22736 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR4A1P22736 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR4A1P22736 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.73■□□□□ 0.43
NR4A1P22736 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
NR4A1P22736 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR4A1P22736 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.72■□□□□ 0.43
NR4A1P22736 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NR4A1P22736 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR4A1P22736 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NR4A1P22736 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR4A1P22736 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR4A1P22736 AL161938.1-201ENST00000569833 2180 ntBASIC17.72■□□□□ 0.43
NR4A1P22736 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR4A1P22736 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
NR4A1P22736 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR4A1P22736 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.72■□□□□ 0.43
NR4A1P22736 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
NR4A1P22736 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR4A1P22736 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NR4A1P22736 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NR4A1P22736 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR4A1P22736 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NR4A1P22736 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.72■□□□□ 0.43
NR4A1P22736 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.72■□□□□ 0.43
NR4A1P22736 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.72■□□□□ 0.43
NR4A1P22736 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NR4A1P22736 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NR4A1P22736 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR4A1P22736 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR4A1P22736 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.72■□□□□ 0.43
NR4A1P22736 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.72■□□□□ 0.43
NR4A1P22736 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.72■□□□□ 0.43
NR4A1P22736 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR4A1P22736 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.72■□□□□ 0.43
NR4A1P22736 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NR4A1P22736 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR4A1P22736 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NR4A1P22736 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR4A1P22736 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR4A1P22736 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR4A1P22736 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.72■□□□□ 0.43
NR4A1P22736 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms