Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.84■□□□□ 0.93
RFX1P22670 MIR6786-201ENST00000616843 113 ntBASIC20.84■□□□□ 0.93
RFX1P22670 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.84■□□□□ 0.93
RFX1P22670 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.84■□□□□ 0.93
RFX1P22670 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.84■□□□□ 0.93
RFX1P22670 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RFX1P22670 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFX1P22670 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFX1P22670 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RFX1P22670 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFX1P22670 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
RFX1P22670 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFX1P22670 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.83■□□□□ 0.93
RFX1P22670 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFX1P22670 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.83■□□□□ 0.93
RFX1P22670 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
RFX1P22670 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RFX1P22670 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RFX1P22670 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
RFX1P22670 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
RFX1P22670 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RFX1P22670 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFX1P22670 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RFX1P22670 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.83■□□□□ 0.93
RFX1P22670 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RFX1P22670 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFX1P22670 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFX1P22670 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
RFX1P22670 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.83■□□□□ 0.93
RFX1P22670 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.83■□□□□ 0.93
RFX1P22670 AL353807.1-201ENST00000427475 662 ntBASIC20.83■□□□□ 0.93
RFX1P22670 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.83■□□□□ 0.93
RFX1P22670 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
RFX1P22670 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.83■□□□□ 0.93
RFX1P22670 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.83■□□□□ 0.93
RFX1P22670 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RFX1P22670 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
RFX1P22670 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.83■□□□□ 0.92
RFX1P22670 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RFX1P22670 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RFX1P22670 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RFX1P22670 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RFX1P22670 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RFX1P22670 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.83■□□□□ 0.92
RFX1P22670 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFX1P22670 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RFX1P22670 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFX1P22670 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RFX1P22670 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.82■□□□□ 0.92
RFX1P22670 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RFX1P22670 HTR7P1-201ENST00000538670 1336 ntBASIC20.82■□□□□ 0.92
RFX1P22670 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RFX1P22670 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RFX1P22670 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFX1P22670 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
RFX1P22670 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFX1P22670 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFX1P22670 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RFX1P22670 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.82■□□□□ 0.92
RFX1P22670 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.82■□□□□ 0.92
RFX1P22670 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.82■□□□□ 0.92
RFX1P22670 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.82■□□□□ 0.92
RFX1P22670 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.82■□□□□ 0.92
RFX1P22670 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.82■□□□□ 0.92
RFX1P22670 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.82■□□□□ 0.92
RFX1P22670 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.82■□□□□ 0.92
RFX1P22670 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFX1P22670 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.82■□□□□ 0.92
RFX1P22670 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFX1P22670 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RFX1P22670 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RFX1P22670 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFX1P22670 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
RFX1P22670 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RFX1P22670 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
RFX1P22670 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.81■□□□□ 0.92
RFX1P22670 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
RFX1P22670 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFX1P22670 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFX1P22670 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFX1P22670 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RFX1P22670 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.81■□□□□ 0.92
RFX1P22670 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.81■□□□□ 0.92
RFX1P22670 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.81■□□□□ 0.92
RFX1P22670 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.81■□□□□ 0.92
RFX1P22670 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFX1P22670 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.81■□□□□ 0.92
RFX1P22670 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
RFX1P22670 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFX1P22670 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.8■□□□□ 0.92
RFX1P22670 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.8■□□□□ 0.92
RFX1P22670 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFX1P22670 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFX1P22670 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RFX1P22670 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFX1P22670 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RFX1P22670 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.8■□□□□ 0.92
RFX1P22670 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.8■□□□□ 0.92
RFX1P22670 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.8■□□□□ 0.92
RFX1P22670 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms