Protein–RNA interactions for Protein: P18077

RPL35A, 60S ribosomal protein L35a, humanhuman

Known RBP Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35AP18077 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35AP18077 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.26□□□□□ -0.13
RPL35AP18077 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.26□□□□□ -0.13
RPL35AP18077 BX088651.1-201ENST00000540551 451 ntBASIC14.26□□□□□ -0.13
RPL35AP18077 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.26□□□□□ -0.13
RPL35AP18077 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC14.26□□□□□ -0.13
RPL35AP18077 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35AP18077 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35AP18077 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35AP18077 AP000525.1-201ENST00000608286 694 ntBASIC14.26□□□□□ -0.13
RPL35AP18077 MIR6786-201ENST00000616843 113 ntBASIC14.26□□□□□ -0.13
RPL35AP18077 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RPL35AP18077 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
RPL35AP18077 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35AP18077 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35AP18077 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35AP18077 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35AP18077 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC14.26□□□□□ -0.13
RPL35AP18077 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC14.26□□□□□ -0.13
RPL35AP18077 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35AP18077 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.26□□□□□ -0.13
RPL35AP18077 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35AP18077 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35AP18077 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35AP18077 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPL35AP18077 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPL35AP18077 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
RPL35AP18077 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
RPL35AP18077 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RPL35AP18077 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
RPL35AP18077 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RPL35AP18077 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPL35AP18077 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPL35AP18077 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPL35AP18077 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RPL35AP18077 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC14.25□□□□□ -0.13
RPL35AP18077 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RPL35AP18077 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RPL35AP18077 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPL35AP18077 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPL35AP18077 UNC93B2-201ENST00000285383 730 ntBASIC14.25□□□□□ -0.13
RPL35AP18077 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPL35AP18077 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
RPL35AP18077 MIR1238-201ENST00000408483 83 ntBASIC14.25□□□□□ -0.13
RPL35AP18077 RBM17P1-201ENST00000453646 1190 ntBASIC14.25□□□□□ -0.13
RPL35AP18077 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RPL35AP18077 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.25□□□□□ -0.13
RPL35AP18077 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
RPL35AP18077 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.25□□□□□ -0.13
RPL35AP18077 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.25□□□□□ -0.13
RPL35AP18077 AC011298.2-201ENST00000617989 482 ntBASIC14.25□□□□□ -0.13
RPL35AP18077 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
RPL35AP18077 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC14.25□□□□□ -0.13
RPL35AP18077 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPL35AP18077 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPL35AP18077 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
RPL35AP18077 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14.25□□□□□ -0.13
RPL35AP18077 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC14.25□□□□□ -0.13
RPL35AP18077 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC14.25□□□□□ -0.13
RPL35AP18077 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
RPL35AP18077 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC14.25□□□□□ -0.13
RPL35AP18077 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPL35AP18077 FSCN1P1-201ENST00000568912 1481 ntBASIC14.25□□□□□ -0.13
RPL35AP18077 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35AP18077 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35AP18077 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35AP18077 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
RPL35AP18077 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35AP18077 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35AP18077 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
RPL35AP18077 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35AP18077 AC011506.1-201ENST00000474329 610 ntBASIC14.24□□□□□ -0.13
RPL35AP18077 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.24□□□□□ -0.13
RPL35AP18077 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC14.24□□□□□ -0.13
RPL35AP18077 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC14.24□□□□□ -0.13
RPL35AP18077 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.24□□□□□ -0.13
RPL35AP18077 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.24□□□□□ -0.13
RPL35AP18077 AC073912.3-201ENST00000624414 853 ntBASIC14.24□□□□□ -0.13
RPL35AP18077 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.24□□□□□ -0.13
RPL35AP18077 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35AP18077 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14.24□□□□□ -0.13
RPL35AP18077 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC14.24□□□□□ -0.13
RPL35AP18077 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RPL35AP18077 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35AP18077 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35AP18077 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL35AP18077 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RPL35AP18077 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RPL35AP18077 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RPL35AP18077 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL35AP18077 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL35AP18077 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL35AP18077 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL35AP18077 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPL35AP18077 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
RPL35AP18077 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL35AP18077 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL35AP18077 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
RPL35AP18077 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.23□□□□□ -0.13
RPL35AP18077 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms