Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRKCAP17252 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
PRKCAP17252 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRKCAP17252 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PRKCAP17252 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.71■□□□□ 0.43
PRKCAP17252 KRT8P8-201ENST00000434750 1448 ntBASIC17.71■□□□□ 0.43
PRKCAP17252 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.71■□□□□ 0.43
PRKCAP17252 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PRKCAP17252 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PRKCAP17252 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.71■□□□□ 0.42
PRKCAP17252 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PRKCAP17252 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
PRKCAP17252 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
PRKCAP17252 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PRKCAP17252 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
PRKCAP17252 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRKCAP17252 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRKCAP17252 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRKCAP17252 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
PRKCAP17252 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.7■□□□□ 0.42
PRKCAP17252 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.7■□□□□ 0.42
PRKCAP17252 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRKCAP17252 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
PRKCAP17252 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRKCAP17252 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.7■□□□□ 0.42
PRKCAP17252 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.7■□□□□ 0.42
PRKCAP17252 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.7■□□□□ 0.42
PRKCAP17252 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.7■□□□□ 0.42
PRKCAP17252 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRKCAP17252 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRKCAP17252 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRKCAP17252 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRKCAP17252 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
PRKCAP17252 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.7■□□□□ 0.42
PRKCAP17252 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRKCAP17252 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRKCAP17252 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRKCAP17252 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRKCAP17252 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.7■□□□□ 0.42
PRKCAP17252 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PRKCAP17252 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRKCAP17252 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PRKCAP17252 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRKCAP17252 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRKCAP17252 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PRKCAP17252 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRKCAP17252 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.69■□□□□ 0.42
PRKCAP17252 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRKCAP17252 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRKCAP17252 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRKCAP17252 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.69■□□□□ 0.42
PRKCAP17252 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PRKCAP17252 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.69■□□□□ 0.42
PRKCAP17252 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.69■□□□□ 0.42
PRKCAP17252 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRKCAP17252 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PRKCAP17252 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRKCAP17252 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRKCAP17252 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PRKCAP17252 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.69■□□□□ 0.42
PRKCAP17252 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PRKCAP17252 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.69■□□□□ 0.42
PRKCAP17252 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.69■□□□□ 0.42
PRKCAP17252 AL359736.2-201ENST00000621992 437 ntBASIC17.69■□□□□ 0.42
PRKCAP17252 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.69■□□□□ 0.42
PRKCAP17252 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.69■□□□□ 0.42
PRKCAP17252 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.69■□□□□ 0.42
PRKCAP17252 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRKCAP17252 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.69■□□□□ 0.42
PRKCAP17252 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRKCAP17252 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRKCAP17252 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRKCAP17252 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRKCAP17252 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRKCAP17252 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRKCAP17252 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRKCAP17252 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.68■□□□□ 0.42
PRKCAP17252 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRKCAP17252 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRKCAP17252 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRKCAP17252 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.68■□□□□ 0.42
PRKCAP17252 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRKCAP17252 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PRKCAP17252 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PRKCAP17252 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRKCAP17252 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.68■□□□□ 0.42
PRKCAP17252 KRT16P5-201ENST00000455284 522 ntBASIC17.68■□□□□ 0.42
PRKCAP17252 AC098590.1-201ENST00000468126 897 ntBASIC17.68■□□□□ 0.42
PRKCAP17252 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.68■□□□□ 0.42
PRKCAP17252 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PRKCAP17252 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRKCAP17252 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRKCAP17252 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRKCAP17252 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PRKCAP17252 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PRKCAP17252 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRKCAP17252 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRKCAP17252 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.67■□□□□ 0.42
PRKCAP17252 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRKCAP17252 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms