Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCNYL3P0C7X3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.47■□□□□ 0.55
CCNYL3P0C7X3 AC128688.1-201ENST00000487626 519 ntBASIC18.47■□□□□ 0.55
CCNYL3P0C7X3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCNYL3P0C7X3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCNYL3P0C7X3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCNYL3P0C7X3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCNYL3P0C7X3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCNYL3P0C7X3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCNYL3P0C7X3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.47■□□□□ 0.55
CCNYL3P0C7X3 AL691432.2-201ENST00000607222 2038 ntBASIC18.47■□□□□ 0.55
CCNYL3P0C7X3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCNYL3P0C7X3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.47■□□□□ 0.55
CCNYL3P0C7X3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCNYL3P0C7X3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCNYL3P0C7X3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCNYL3P0C7X3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CCNYL3P0C7X3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCNYL3P0C7X3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCNYL3P0C7X3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCNYL3P0C7X3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CCNYL3P0C7X3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCNYL3P0C7X3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCNYL3P0C7X3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.46■□□□□ 0.55
CCNYL3P0C7X3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCNYL3P0C7X3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCNYL3P0C7X3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCNYL3P0C7X3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCNYL3P0C7X3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.46■□□□□ 0.55
CCNYL3P0C7X3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.46■□□□□ 0.55
CCNYL3P0C7X3 SLC25A3P1-201ENST00000443844 931 ntBASIC18.46■□□□□ 0.55
CCNYL3P0C7X3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.46■□□□□ 0.55
CCNYL3P0C7X3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.46■□□□□ 0.55
CCNYL3P0C7X3 AP005242.2-201ENST00000580065 1175 ntBASIC18.46■□□□□ 0.55
CCNYL3P0C7X3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.46■□□□□ 0.55
CCNYL3P0C7X3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.46■□□□□ 0.55
CCNYL3P0C7X3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCNYL3P0C7X3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCNYL3P0C7X3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCNYL3P0C7X3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CCNYL3P0C7X3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCNYL3P0C7X3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.46■□□□□ 0.55
CCNYL3P0C7X3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCNYL3P0C7X3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CCNYL3P0C7X3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
CCNYL3P0C7X3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCNYL3P0C7X3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 TMEM179-206ENST00000616017 1645 ntBASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 ATP5G1P1-201ENST00000448724 379 ntBASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 AC011506.1-201ENST00000474329 610 ntBASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 AL445228.2-201ENST00000605589 952 ntBASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 HCG11-201ENST00000411553 5696 ntBASIC18.45■□□□□ 0.54
CCNYL3P0C7X3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCNYL3P0C7X3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCNYL3P0C7X3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCNYL3P0C7X3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCNYL3P0C7X3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCNYL3P0C7X3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CCNYL3P0C7X3 MESTP1-201ENST00000404287 994 ntBASIC18.44■□□□□ 0.54
CCNYL3P0C7X3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.44■□□□□ 0.54
CCNYL3P0C7X3 EGLN1P1-201ENST00000531623 762 ntBASIC18.44■□□□□ 0.54
CCNYL3P0C7X3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.44■□□□□ 0.54
CCNYL3P0C7X3 SLC25A1P4-201ENST00000567977 778 ntBASIC18.44■□□□□ 0.54
CCNYL3P0C7X3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCNYL3P0C7X3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCNYL3P0C7X3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCNYL3P0C7X3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CCNYL3P0C7X3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCNYL3P0C7X3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCNYL3P0C7X3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms