Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC24.43■■□□□ 1.5
SNRPA1P09661 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC24.43■■□□□ 1.5
SNRPA1P09661 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC24.43■■□□□ 1.5
SNRPA1P09661 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC24.43■■□□□ 1.5
SNRPA1P09661 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC24.43■■□□□ 1.5
SNRPA1P09661 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SNRPA1P09661 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
SNRPA1P09661 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SNRPA1P09661 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
SNRPA1P09661 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
SNRPA1P09661 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
SNRPA1P09661 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
SNRPA1P09661 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC24.43■■□□□ 1.5
SNRPA1P09661 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC24.42■■□□□ 1.5
SNRPA1P09661 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC24.42■■□□□ 1.5
SNRPA1P09661 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
SNRPA1P09661 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SNRPA1P09661 BET1L-202ENST00000332865 533 ntTSL 5 BASIC24.42■■□□□ 1.5
SNRPA1P09661 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
SNRPA1P09661 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SNRPA1P09661 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC24.42■■□□□ 1.5
SNRPA1P09661 DFFB-212ENST00000625756 649 ntTSL 5 BASIC24.42■■□□□ 1.5
SNRPA1P09661 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
SNRPA1P09661 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
SNRPA1P09661 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC24.42■■□□□ 1.5
SNRPA1P09661 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
SNRPA1P09661 USP48-205ENST00000421625 2818 ntTSL 2 BASIC24.42■■□□□ 1.5
SNRPA1P09661 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SNRPA1P09661 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC24.42■■□□□ 1.5
SNRPA1P09661 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC24.41■■□□□ 1.5
SNRPA1P09661 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC24.41■■□□□ 1.5
SNRPA1P09661 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SNRPA1P09661 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC24.41■■□□□ 1.5
SNRPA1P09661 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC24.41■■□□□ 1.5
SNRPA1P09661 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC24.41■■□□□ 1.5
SNRPA1P09661 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SNRPA1P09661 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SNRPA1P09661 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
SNRPA1P09661 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC24.41■■□□□ 1.5
SNRPA1P09661 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SNRPA1P09661 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SNRPA1P09661 STARP1-201ENST00000397973 869 ntBASIC24.41■■□□□ 1.5
SNRPA1P09661 NMU-205ENST00000511469 756 ntTSL 3 BASIC24.41■■□□□ 1.5
SNRPA1P09661 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC24.41■■□□□ 1.5
SNRPA1P09661 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC24.41■■□□□ 1.5
SNRPA1P09661 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC24.41■■□□□ 1.5
SNRPA1P09661 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC24.41■■□□□ 1.5
SNRPA1P09661 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SNRPA1P09661 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SNRPA1P09661 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
SNRPA1P09661 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SNRPA1P09661 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SNRPA1P09661 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC24.41■■□□□ 1.5
SNRPA1P09661 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SNRPA1P09661 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC24.41■■□□□ 1.5
SNRPA1P09661 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
SNRPA1P09661 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SNRPA1P09661 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SNRPA1P09661 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SNRPA1P09661 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SNRPA1P09661 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SNRPA1P09661 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SNRPA1P09661 DAP-202ENST00000432074 1048 ntTSL 2 BASIC24.4■■□□□ 1.5
SNRPA1P09661 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC24.4■■□□□ 1.5
SNRPA1P09661 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC24.4■■□□□ 1.5
SNRPA1P09661 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
SNRPA1P09661 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC24.4■■□□□ 1.5
SNRPA1P09661 USF2-205ENST00000594064 1179 ntTSL 2 BASIC24.4■■□□□ 1.5
SNRPA1P09661 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
SNRPA1P09661 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC24.4■■□□□ 1.5
SNRPA1P09661 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SNRPA1P09661 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
SNRPA1P09661 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SNRPA1P09661 GPAT2P1-201ENST00000444924 1672 ntBASIC24.4■■□□□ 1.5
SNRPA1P09661 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SNRPA1P09661 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SNRPA1P09661 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC24.39■■□□□ 1.5
SNRPA1P09661 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SNRPA1P09661 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SNRPA1P09661 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SNRPA1P09661 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC24.39■■□□□ 1.5
SNRPA1P09661 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SNRPA1P09661 GAD2-202ENST00000376248 680 ntTSL 5 BASIC24.39■■□□□ 1.49
SNRPA1P09661 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC24.39■■□□□ 1.49
SNRPA1P09661 HYMAI.1-201ENST00000620949 238 ntBASIC24.39■■□□□ 1.49
SNRPA1P09661 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC24.39■■□□□ 1.49
SNRPA1P09661 IER3-202ENST00000376377 1350 ntBASIC24.39■■□□□ 1.49
SNRPA1P09661 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC24.39■■□□□ 1.49
SNRPA1P09661 TREX1-205ENST00000625293 1783 ntBASIC24.39■■□□□ 1.49
SNRPA1P09661 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SNRPA1P09661 PWWP2AP1-201ENST00000429776 2273 ntBASIC24.38■■□□□ 1.49
SNRPA1P09661 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SNRPA1P09661 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SNRPA1P09661 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SNRPA1P09661 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC24.38■■□□□ 1.49
SNRPA1P09661 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SNRPA1P09661 AC005332.1-201ENST00000577698 1310 ntBASIC24.38■■□□□ 1.49
SNRPA1P09661 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SNRPA1P09661 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SNRPA1P09661 AC112907.2-201ENST00000448639 330 ntBASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms