Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HOXC6P09630 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.66■■□□□ 1.06
HOXC6P09630 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
HOXC6P09630 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.65■■□□□ 1.06
HOXC6P09630 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HOXC6P09630 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
HOXC6P09630 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HOXC6P09630 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HOXC6P09630 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HOXC6P09630 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HOXC6P09630 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
HOXC6P09630 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HOXC6P09630 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.65■■□□□ 1.06
HOXC6P09630 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.65■■□□□ 1.06
HOXC6P09630 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.65■■□□□ 1.06
HOXC6P09630 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.65■■□□□ 1.06
HOXC6P09630 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
HOXC6P09630 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HOXC6P09630 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.65■■□□□ 1.06
HOXC6P09630 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
HOXC6P09630 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
HOXC6P09630 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
HOXC6P09630 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.64■■□□□ 1.06
HOXC6P09630 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
HOXC6P09630 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HOXC6P09630 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HOXC6P09630 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HOXC6P09630 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HOXC6P09630 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HOXC6P09630 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
HOXC6P09630 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HOXC6P09630 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.64■■□□□ 1.05
HOXC6P09630 AC034232.1-201ENST00000506026 1064 ntBASIC21.64■■□□□ 1.05
HOXC6P09630 AC092119.3-201ENST00000612618 583 ntBASIC21.64■■□□□ 1.05
HOXC6P09630 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HOXC6P09630 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HOXC6P09630 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HOXC6P09630 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HOXC6P09630 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
HOXC6P09630 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.64■■□□□ 1.05
HOXC6P09630 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HOXC6P09630 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HOXC6P09630 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HOXC6P09630 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HOXC6P09630 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.63■■□□□ 1.05
HOXC6P09630 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HOXC6P09630 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
HOXC6P09630 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.63■■□□□ 1.05
HOXC6P09630 AC092597.1-201ENST00000487352 616 ntBASIC21.63■■□□□ 1.05
HOXC6P09630 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.63■■□□□ 1.05
HOXC6P09630 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.63■■□□□ 1.05
HOXC6P09630 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.63■■□□□ 1.05
HOXC6P09630 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
HOXC6P09630 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
HOXC6P09630 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HOXC6P09630 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.63■■□□□ 1.05
HOXC6P09630 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HOXC6P09630 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HOXC6P09630 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
HOXC6P09630 AC104417.2-201ENST00000562989 1793 ntBASIC21.63■■□□□ 1.05
HOXC6P09630 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HOXC6P09630 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HOXC6P09630 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
HOXC6P09630 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
HOXC6P09630 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.62■■□□□ 1.05
HOXC6P09630 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
HOXC6P09630 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.62■■□□□ 1.05
HOXC6P09630 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.62■■□□□ 1.05
HOXC6P09630 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.62■■□□□ 1.05
HOXC6P09630 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HOXC6P09630 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HOXC6P09630 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.62■■□□□ 1.05
HOXC6P09630 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.62■■□□□ 1.05
HOXC6P09630 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
HOXC6P09630 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.62■■□□□ 1.05
HOXC6P09630 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
HOXC6P09630 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.62■■□□□ 1.05
HOXC6P09630 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HOXC6P09630 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.62■■□□□ 1.05
HOXC6P09630 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.62■■□□□ 1.05
HOXC6P09630 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
HOXC6P09630 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
HOXC6P09630 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.62■■□□□ 1.05
HOXC6P09630 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HOXC6P09630 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HOXC6P09630 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.61■■□□□ 1.05
HOXC6P09630 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HOXC6P09630 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.61■■□□□ 1.05
HOXC6P09630 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HOXC6P09630 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.61■■□□□ 1.05
HOXC6P09630 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.61■■□□□ 1.05
HOXC6P09630 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HOXC6P09630 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
HOXC6P09630 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
HOXC6P09630 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HOXC6P09630 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.61■■□□□ 1.05
HOXC6P09630 MIR3652-201ENST00000579335 131 ntBASIC21.61■■□□□ 1.05
HOXC6P09630 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.61■■□□□ 1.05
HOXC6P09630 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.61■■□□□ 1.05
HOXC6P09630 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms