Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.85■□□□□ 0.77
RHOP08100 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.85■□□□□ 0.77
RHOP08100 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RHOP08100 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RHOP08100 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RHOP08100 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RHOP08100 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RHOP08100 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RHOP08100 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RHOP08100 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.85■□□□□ 0.77
RHOP08100 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.85■□□□□ 0.77
RHOP08100 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.85■□□□□ 0.77
RHOP08100 AL121894.2-201ENST00000602977 491 ntBASIC19.85■□□□□ 0.77
RHOP08100 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.85■□□□□ 0.77
RHOP08100 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RHOP08100 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RHOP08100 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RHOP08100 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
RHOP08100 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RHOP08100 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.85■□□□□ 0.77
RHOP08100 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RHOP08100 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.84■□□□□ 0.77
RHOP08100 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RHOP08100 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RHOP08100 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RHOP08100 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RHOP08100 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.84■□□□□ 0.77
RHOP08100 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RHOP08100 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
RHOP08100 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.84■□□□□ 0.77
RHOP08100 DUSP5P1-201ENST00000441325 1139 ntBASIC19.84■□□□□ 0.77
RHOP08100 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.84■□□□□ 0.77
RHOP08100 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RHOP08100 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RHOP08100 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RHOP08100 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.84■□□□□ 0.77
RHOP08100 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
RHOP08100 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RHOP08100 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
RHOP08100 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RHOP08100 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RHOP08100 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RHOP08100 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RHOP08100 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RHOP08100 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RHOP08100 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RHOP08100 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RHOP08100 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
RHOP08100 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.83■□□□□ 0.77
RHOP08100 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.83■□□□□ 0.77
RHOP08100 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.83■□□□□ 0.77
RHOP08100 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RHOP08100 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RHOP08100 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
RHOP08100 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RHOP08100 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
RHOP08100 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
RHOP08100 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
RHOP08100 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RHOP08100 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RHOP08100 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.83■□□□□ 0.77
RHOP08100 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.83■□□□□ 0.77
RHOP08100 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.83■□□□□ 0.77
RHOP08100 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.83■□□□□ 0.77
RHOP08100 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.83■□□□□ 0.77
RHOP08100 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.83■□□□□ 0.77
RHOP08100 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.83■□□□□ 0.77
RHOP08100 GPAT2P1-201ENST00000444924 1672 ntBASIC19.83■□□□□ 0.76
RHOP08100 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
RHOP08100 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.83■□□□□ 0.76
RHOP08100 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RHOP08100 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RHOP08100 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RHOP08100 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
RHOP08100 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.83■□□□□ 0.76
RHOP08100 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RHOP08100 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.82■□□□□ 0.76
RHOP08100 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RHOP08100 LINC01006-201ENST00000333319 2292 ntBASIC19.82■□□□□ 0.76
RHOP08100 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RHOP08100 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RHOP08100 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.82■□□□□ 0.76
RHOP08100 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RHOP08100 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RHOP08100 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RHOP08100 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RHOP08100 SPDYE13P-201ENST00000445314 798 ntBASIC19.82■□□□□ 0.76
RHOP08100 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.82■□□□□ 0.76
RHOP08100 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.82■□□□□ 0.76
RHOP08100 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RHOP08100 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.82■□□□□ 0.76
RHOP08100 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RHOP08100 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.82■□□□□ 0.76
RHOP08100 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.82■□□□□ 0.76
RHOP08100 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RHOP08100 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RHOP08100 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RHOP08100 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RHOP08100 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.82■□□□□ 0.76
RHOP08100 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms