Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC21.48■■□□□ 1.03
TPM3P06753 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
TPM3P06753 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TPM3P06753 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TPM3P06753 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TPM3P06753 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
TPM3P06753 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TPM3P06753 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
TPM3P06753 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
TPM3P06753 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TPM3P06753 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TPM3P06753 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TPM3P06753 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
TPM3P06753 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TPM3P06753 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.47■■□□□ 1.03
TPM3P06753 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.47■■□□□ 1.03
TPM3P06753 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TPM3P06753 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TPM3P06753 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.47■■□□□ 1.03
TPM3P06753 AL589743.5-201ENST00000616611 1050 ntBASIC21.47■■□□□ 1.03
TPM3P06753 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TPM3P06753 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TPM3P06753 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
TPM3P06753 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
TPM3P06753 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TPM3P06753 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TPM3P06753 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.47■■□□□ 1.03
TPM3P06753 OR6D1P-202ENST00000641007 5290 ntBASIC21.47■■□□□ 1.03
TPM3P06753 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TPM3P06753 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TPM3P06753 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TPM3P06753 PKD1P1-201ENST00000458669 6805 ntBASIC21.46■■□□□ 1.03
TPM3P06753 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TPM3P06753 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.46■■□□□ 1.03
TPM3P06753 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TPM3P06753 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.46■■□□□ 1.03
TPM3P06753 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.46■■□□□ 1.03
TPM3P06753 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TPM3P06753 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.46■■□□□ 1.03
TPM3P06753 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TPM3P06753 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TPM3P06753 MIR638-201ENST00000385237 100 ntBASIC21.46■■□□□ 1.03
TPM3P06753 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.46■■□□□ 1.03
TPM3P06753 NTF6G-201ENST00000591094 616 ntBASIC21.46■■□□□ 1.03
TPM3P06753 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TPM3P06753 AC069236.1-201ENST00000604339 616 ntBASIC21.46■■□□□ 1.03
TPM3P06753 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
TPM3P06753 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TPM3P06753 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TPM3P06753 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
TPM3P06753 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
TPM3P06753 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.46■■□□□ 1.03
TPM3P06753 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
TPM3P06753 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TPM3P06753 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.46■■□□□ 1.03
TPM3P06753 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
TPM3P06753 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.45■■□□□ 1.03
TPM3P06753 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
TPM3P06753 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
TPM3P06753 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC21.45■■□□□ 1.03
TPM3P06753 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
TPM3P06753 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TPM3P06753 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
TPM3P06753 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TPM3P06753 FP475955.4-201ENST00000623131 1990 ntBASIC21.45■■□□□ 1.02
TPM3P06753 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TPM3P06753 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC21.45■■□□□ 1.02
TPM3P06753 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TPM3P06753 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.45■■□□□ 1.02
TPM3P06753 C2orf69P4-201ENST00000565394 541 ntBASIC21.45■■□□□ 1.02
TPM3P06753 AC008694.1-202ENST00000636953 945 ntBASIC21.45■■□□□ 1.02
TPM3P06753 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
TPM3P06753 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.45■■□□□ 1.02
TPM3P06753 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.45■■□□□ 1.02
TPM3P06753 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
TPM3P06753 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.45■■□□□ 1.02
TPM3P06753 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TPM3P06753 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TPM3P06753 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TPM3P06753 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.45■■□□□ 1.02
TPM3P06753 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TPM3P06753 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TPM3P06753 AC018553.1-201ENST00000616682 1458 ntBASIC21.45■■□□□ 1.02
TPM3P06753 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TPM3P06753 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TPM3P06753 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TPM3P06753 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.44■■□□□ 1.02
TPM3P06753 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TPM3P06753 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TPM3P06753 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
TPM3P06753 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TPM3P06753 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TPM3P06753 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TPM3P06753 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
TPM3P06753 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TPM3P06753 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TPM3P06753 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TPM3P06753 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TPM3P06753 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TPM3P06753 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms