Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HMGN1P05114 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGN1P05114 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGN1P05114 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGN1P05114 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGN1P05114 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGN1P05114 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGN1P05114 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGN1P05114 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.34■□□□□ 0.37
HMGN1P05114 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.34■□□□□ 0.37
HMGN1P05114 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
HMGN1P05114 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGN1P05114 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.34■□□□□ 0.37
HMGN1P05114 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGN1P05114 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.34■□□□□ 0.37
HMGN1P05114 RPS2P52-201ENST00000469610 820 ntBASIC17.34■□□□□ 0.37
HMGN1P05114 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.34■□□□□ 0.37
HMGN1P05114 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGN1P05114 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGN1P05114 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.34■□□□□ 0.37
HMGN1P05114 AC105036.2-201ENST00000569468 176 ntBASIC17.34■□□□□ 0.37
HMGN1P05114 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGN1P05114 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.34■□□□□ 0.37
HMGN1P05114 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.34■□□□□ 0.37
HMGN1P05114 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGN1P05114 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGN1P05114 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGN1P05114 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HMGN1P05114 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGN1P05114 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGN1P05114 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
HMGN1P05114 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMGN1P05114 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.33■□□□□ 0.37
HMGN1P05114 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.33■□□□□ 0.37
HMGN1P05114 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMGN1P05114 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.33■□□□□ 0.37
HMGN1P05114 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.33■□□□□ 0.37
HMGN1P05114 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMGN1P05114 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HMGN1P05114 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HMGN1P05114 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
HMGN1P05114 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
HMGN1P05114 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMGN1P05114 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HMGN1P05114 AC104581.1-202ENST00000635932 2618 ntBASIC17.33■□□□□ 0.36
HMGN1P05114 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGN1P05114 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.33■□□□□ 0.36
HMGN1P05114 AC004911.1-201ENST00000416316 871 ntBASIC17.33■□□□□ 0.36
HMGN1P05114 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.33■□□□□ 0.36
HMGN1P05114 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.33■□□□□ 0.36
HMGN1P05114 AL121906.2-201ENST00000621597 723 ntBASIC17.33■□□□□ 0.36
HMGN1P05114 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGN1P05114 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.33■□□□□ 0.36
HMGN1P05114 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HMGN1P05114 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.33■□□□□ 0.36
HMGN1P05114 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGN1P05114 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGN1P05114 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.33■□□□□ 0.36
HMGN1P05114 FEM1AP3-201ENST00000403722 1741 ntBASIC17.33■□□□□ 0.36
HMGN1P05114 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGN1P05114 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGN1P05114 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGN1P05114 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGN1P05114 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGN1P05114 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.32■□□□□ 0.36
HMGN1P05114 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGN1P05114 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HMGN1P05114 AC135050.7-201ENST00000624508 2218 ntBASIC17.32■□□□□ 0.36
HMGN1P05114 HTR7P1-202ENST00000624664 4411 ntBASIC17.32■□□□□ 0.36
HMGN1P05114 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGN1P05114 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMGN1P05114 AL512353.2-201ENST00000448759 1962 ntBASIC17.32■□□□□ 0.36
HMGN1P05114 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGN1P05114 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
HMGN1P05114 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGN1P05114 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGN1P05114 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.32■□□□□ 0.36
HMGN1P05114 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.32■□□□□ 0.36
HMGN1P05114 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGN1P05114 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGN1P05114 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMGN1P05114 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGN1P05114 AC006557.6-201ENST00000623071 864 ntBASIC17.32■□□□□ 0.36
HMGN1P05114 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.32■□□□□ 0.36
HMGN1P05114 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMGN1P05114 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
HMGN1P05114 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HMGN1P05114 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HMGN1P05114 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGN1P05114 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGN1P05114 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.32■□□□□ 0.36
HMGN1P05114 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGN1P05114 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGN1P05114 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGN1P05114 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGN1P05114 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
HMGN1P05114 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGN1P05114 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGN1P05114 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGN1P05114 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms