Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC23.06■■□□□ 1.28
CHGBP05060 DGCR10-201ENST00000609839 495 ntBASIC23.06■■□□□ 1.28
CHGBP05060 FP475955.4-201ENST00000623131 1990 ntBASIC23.06■■□□□ 1.28
CHGBP05060 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CHGBP05060 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC23.06■■□□□ 1.28
CHGBP05060 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC23.06■■□□□ 1.28
CHGBP05060 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CHGBP05060 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CHGBP05060 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
CHGBP05060 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CHGBP05060 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC23.05■■□□□ 1.28
CHGBP05060 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
CHGBP05060 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC23.05■■□□□ 1.28
CHGBP05060 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CHGBP05060 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC23.05■■□□□ 1.28
CHGBP05060 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CHGBP05060 CKBP1-201ENST00000565489 1086 ntBASIC23.05■■□□□ 1.28
CHGBP05060 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CHGBP05060 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CHGBP05060 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC23.05■■□□□ 1.28
CHGBP05060 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC23.05■■□□□ 1.28
CHGBP05060 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CHGBP05060 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
CHGBP05060 GAS2L1P1-201ENST00000420145 1480 ntBASIC23.05■■□□□ 1.28
CHGBP05060 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CHGBP05060 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CHGBP05060 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CHGBP05060 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CHGBP05060 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
CHGBP05060 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC23.04■■□□□ 1.28
CHGBP05060 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CHGBP05060 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CHGBP05060 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CHGBP05060 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
CHGBP05060 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC23.04■■□□□ 1.28
CHGBP05060 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC23.04■■□□□ 1.28
CHGBP05060 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CHGBP05060 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC23.04■■□□□ 1.28
CHGBP05060 AP005242.2-201ENST00000580065 1175 ntBASIC23.04■■□□□ 1.28
CHGBP05060 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
CHGBP05060 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC23.04■■□□□ 1.28
CHGBP05060 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CHGBP05060 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CHGBP05060 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC23.04■■□□□ 1.28
CHGBP05060 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CHGBP05060 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CHGBP05060 IRX1P1-201ENST00000438849 1838 ntBASIC23.03■■□□□ 1.28
CHGBP05060 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CHGBP05060 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CHGBP05060 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CHGBP05060 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
CHGBP05060 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CHGBP05060 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CHGBP05060 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CHGBP05060 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CHGBP05060 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CHGBP05060 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CHGBP05060 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CHGBP05060 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC23.03■■□□□ 1.28
CHGBP05060 GLDC-219ENST00000640208 420 ntTSL 2 BASIC23.03■■□□□ 1.28
CHGBP05060 TBC1D3P2-202ENST00000577902 1649 ntBASIC23.03■■□□□ 1.28
CHGBP05060 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC23.03■■□□□ 1.28
CHGBP05060 AC141586.3-201ENST00000562166 1838 ntBASIC23.03■■□□□ 1.28
CHGBP05060 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CHGBP05060 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC23.03■■□□□ 1.28
CHGBP05060 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC23.03■■□□□ 1.28
CHGBP05060 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CHGBP05060 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CHGBP05060 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
CHGBP05060 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CHGBP05060 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
CHGBP05060 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC23.02■■□□□ 1.28
CHGBP05060 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
CHGBP05060 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC23.02■■□□□ 1.28
CHGBP05060 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC23.02■■□□□ 1.28
CHGBP05060 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
CHGBP05060 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.02■■□□□ 1.28
CHGBP05060 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
CHGBP05060 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC23.02■■□□□ 1.28
CHGBP05060 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CHGBP05060 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CHGBP05060 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
CHGBP05060 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC23.02■■□□□ 1.28
CHGBP05060 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
CHGBP05060 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CHGBP05060 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC23.02■■□□□ 1.28
CHGBP05060 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CHGBP05060 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC23.01■■□□□ 1.27
CHGBP05060 AL161938.1-201ENST00000569833 2180 ntBASIC23.01■■□□□ 1.27
CHGBP05060 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CHGBP05060 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CHGBP05060 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CHGBP05060 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CHGBP05060 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC23.01■■□□□ 1.27
CHGBP05060 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC23.01■■□□□ 1.27
CHGBP05060 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
CHGBP05060 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CHGBP05060 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CHGBP05060 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CHGBP05060 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms