Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APOEP02649 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
APOEP02649 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APOEP02649 FSCN1P1-201ENST00000568912 1481 ntBASIC20.05■□□□□ 0.8
APOEP02649 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
APOEP02649 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.05■□□□□ 0.8
APOEP02649 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APOEP02649 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APOEP02649 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
APOEP02649 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.05■□□□□ 0.8
APOEP02649 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.05■□□□□ 0.8
APOEP02649 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
APOEP02649 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
APOEP02649 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.05■□□□□ 0.8
APOEP02649 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.05■□□□□ 0.8
APOEP02649 MIR6786-201ENST00000616843 113 ntBASIC20.05■□□□□ 0.8
APOEP02649 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.05■□□□□ 0.8
APOEP02649 LINC01465-201ENST00000408887 1940 ntBASIC20.05■□□□□ 0.8
APOEP02649 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.05■□□□□ 0.8
APOEP02649 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
APOEP02649 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
APOEP02649 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APOEP02649 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.05■□□□□ 0.8
APOEP02649 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APOEP02649 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
APOEP02649 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
APOEP02649 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
APOEP02649 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
APOEP02649 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.04■□□□□ 0.8
APOEP02649 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APOEP02649 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.04■□□□□ 0.8
APOEP02649 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.04■□□□□ 0.8
APOEP02649 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
APOEP02649 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
APOEP02649 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
APOEP02649 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
APOEP02649 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.04■□□□□ 0.8
APOEP02649 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
APOEP02649 AC116562.2-201ENST00000507042 360 ntBASIC20.04■□□□□ 0.8
APOEP02649 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.04■□□□□ 0.8
APOEP02649 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
APOEP02649 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.04■□□□□ 0.8
APOEP02649 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.04■□□□□ 0.8
APOEP02649 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
APOEP02649 REXO1L10P-201ENST00000615707 1290 ntBASIC20.04■□□□□ 0.8
APOEP02649 REXO1L12P-201ENST00000622156 912 ntBASIC20.04■□□□□ 0.8
APOEP02649 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APOEP02649 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
APOEP02649 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APOEP02649 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
APOEP02649 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
APOEP02649 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
APOEP02649 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
APOEP02649 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APOEP02649 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
APOEP02649 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
APOEP02649 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
APOEP02649 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
APOEP02649 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
APOEP02649 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.03■□□□□ 0.8
APOEP02649 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
APOEP02649 RCC2P6-201ENST00000526625 1557 ntBASIC20.03■□□□□ 0.8
APOEP02649 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
APOEP02649 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.03■□□□□ 0.8
APOEP02649 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
APOEP02649 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
APOEP02649 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
APOEP02649 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
APOEP02649 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
APOEP02649 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
APOEP02649 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
APOEP02649 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
APOEP02649 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
APOEP02649 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
APOEP02649 AC004951.3-201ENST00000418645 1148 ntBASIC20.02■□□□□ 0.8
APOEP02649 B3GAT3P1-201ENST00000471720 806 ntBASIC20.02■□□□□ 0.8
APOEP02649 Z85996.1-201ENST00000494644 937 ntBASIC20.02■□□□□ 0.8
APOEP02649 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.02■□□□□ 0.8
APOEP02649 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
APOEP02649 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.02■□□□□ 0.8
APOEP02649 AL355075.4-201ENST00000554988 638 ntBASIC20.02■□□□□ 0.8
APOEP02649 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.02■□□□□ 0.8
APOEP02649 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.02■□□□□ 0.8
APOEP02649 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.02■□□□□ 0.8
APOEP02649 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.02■□□□□ 0.8
APOEP02649 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.02■□□□□ 0.8
APOEP02649 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
APOEP02649 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
APOEP02649 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
APOEP02649 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
APOEP02649 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.02■□□□□ 0.8
APOEP02649 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
APOEP02649 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
APOEP02649 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.02■□□□□ 0.79
APOEP02649 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
APOEP02649 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
APOEP02649 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
APOEP02649 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
APOEP02649 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.01■□□□□ 0.79
APOEP02649 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms