Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.62■□□□□ 0.89
HLA-DRAP01903 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.62■□□□□ 0.89
HLA-DRAP01903 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.62■□□□□ 0.89
HLA-DRAP01903 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DRAP01903 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DRAP01903 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.62■□□□□ 0.89
HLA-DRAP01903 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
HLA-DRAP01903 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DRAP01903 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DRAP01903 AL161938.1-201ENST00000569833 2180 ntBASIC20.62■□□□□ 0.89
HLA-DRAP01903 IRX1P1-201ENST00000438849 1838 ntBASIC20.62■□□□□ 0.89
HLA-DRAP01903 FSCN1P1-201ENST00000568912 1481 ntBASIC20.62■□□□□ 0.89
HLA-DRAP01903 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DRAP01903 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DRAP01903 KRT8P11-201ENST00000409686 1436 ntBASIC20.61■□□□□ 0.89
HLA-DRAP01903 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DRAP01903 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DRAP01903 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.61■□□□□ 0.89
HLA-DRAP01903 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.61■□□□□ 0.89
HLA-DRAP01903 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
HLA-DRAP01903 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DRAP01903 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.61■□□□□ 0.89
HLA-DRAP01903 REXO1L10P-201ENST00000615707 1290 ntBASIC20.61■□□□□ 0.89
HLA-DRAP01903 REXO1L12P-201ENST00000622156 912 ntBASIC20.61■□□□□ 0.89
HLA-DRAP01903 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DRAP01903 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.61■□□□□ 0.89
HLA-DRAP01903 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DRAP01903 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DRAP01903 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.61■□□□□ 0.89
HLA-DRAP01903 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.61■□□□□ 0.89
HLA-DRAP01903 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
HLA-DRAP01903 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DRAP01903 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DRAP01903 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DRAP01903 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-DRAP01903 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
HLA-DRAP01903 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
HLA-DRAP01903 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DRAP01903 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-DRAP01903 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-DRAP01903 AP003071.4-201ENST00000562276 1284 ntBASIC20.6■□□□□ 0.89
HLA-DRAP01903 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-DRAP01903 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-DRAP01903 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.6■□□□□ 0.89
HLA-DRAP01903 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DRAP01903 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DRAP01903 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DRAP01903 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-DRAP01903 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-DRAP01903 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-DRAP01903 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DRAP01903 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DRAP01903 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
HLA-DRAP01903 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.59■□□□□ 0.89
HLA-DRAP01903 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.59■□□□□ 0.89
HLA-DRAP01903 AL049812.1-201ENST00000432563 2267 ntBASIC20.59■□□□□ 0.89
HLA-DRAP01903 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DRAP01903 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DRAP01903 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DRAP01903 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DRAP01903 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DRAP01903 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.59■□□□□ 0.89
HLA-DRAP01903 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
HLA-DRAP01903 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.59■□□□□ 0.89
HLA-DRAP01903 FAM207BP-201ENST00000447172 505 ntBASIC20.59■□□□□ 0.89
HLA-DRAP01903 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
HLA-DRAP01903 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
HLA-DRAP01903 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.59■□□□□ 0.89
HLA-DRAP01903 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.59■□□□□ 0.89
HLA-DRAP01903 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
HLA-DRAP01903 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.59■□□□□ 0.89
HLA-DRAP01903 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DRAP01903 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DRAP01903 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DRAP01903 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.59■□□□□ 0.89
HLA-DRAP01903 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DRAP01903 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.59■□□□□ 0.89
HLA-DRAP01903 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DRAP01903 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DRAP01903 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DRAP01903 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DRAP01903 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.58■□□□□ 0.89
HLA-DRAP01903 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DRAP01903 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DRAP01903 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DRAP01903 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DRAP01903 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.58■□□□□ 0.89
HLA-DRAP01903 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DRAP01903 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DRAP01903 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DRAP01903 FP475955.4-201ENST00000623131 1990 ntBASIC20.58■□□□□ 0.89
HLA-DRAP01903 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
HLA-DRAP01903 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.58■□□□□ 0.89
HLA-DRAP01903 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.58■□□□□ 0.89
HLA-DRAP01903 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DRAP01903 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DRAP01903 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.58■□□□□ 0.88
HLA-DRAP01903 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-DRAP01903 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.58■□□□□ 0.88
HLA-DRAP01903 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms