Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ABCA1O95477 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ABCA1O95477 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ABCA1O95477 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.04■□□□□ 0.16
ABCA1O95477 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
ABCA1O95477 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
ABCA1O95477 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.04■□□□□ 0.16
ABCA1O95477 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ABCA1O95477 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ABCA1O95477 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ABCA1O95477 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ABCA1O95477 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.03■□□□□ 0.16
ABCA1O95477 SLC25A1P2-201ENST00000430693 912 ntBASIC16.03■□□□□ 0.16
ABCA1O95477 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.03■□□□□ 0.16
ABCA1O95477 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.03■□□□□ 0.16
ABCA1O95477 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ABCA1O95477 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ABCA1O95477 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ABCA1O95477 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ABCA1O95477 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ABCA1O95477 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ABCA1O95477 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ABCA1O95477 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.03■□□□□ 0.16
ABCA1O95477 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
ABCA1O95477 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.03■□□□□ 0.16
ABCA1O95477 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ABCA1O95477 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ABCA1O95477 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ABCA1O95477 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ABCA1O95477 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.03■□□□□ 0.16
ABCA1O95477 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ABCA1O95477 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.03■□□□□ 0.16
ABCA1O95477 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ABCA1O95477 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ABCA1O95477 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.03■□□□□ 0.16
ABCA1O95477 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ABCA1O95477 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ABCA1O95477 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ABCA1O95477 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ABCA1O95477 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
ABCA1O95477 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.02■□□□□ 0.16
ABCA1O95477 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ABCA1O95477 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ABCA1O95477 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ABCA1O95477 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
ABCA1O95477 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ABCA1O95477 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.02■□□□□ 0.16
ABCA1O95477 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.02■□□□□ 0.16
ABCA1O95477 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.02■□□□□ 0.16
ABCA1O95477 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.02■□□□□ 0.16
ABCA1O95477 AL441883.1-201ENST00000566170 1045 ntBASIC16.02■□□□□ 0.16
ABCA1O95477 AC093458.2-201ENST00000623150 629 ntBASIC16.02■□□□□ 0.16
ABCA1O95477 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ABCA1O95477 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
ABCA1O95477 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.02■□□□□ 0.16
ABCA1O95477 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ABCA1O95477 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ABCA1O95477 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ABCA1O95477 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.02■□□□□ 0.15
ABCA1O95477 CA15P1-201ENST00000481698 905 ntBASIC16.02■□□□□ 0.15
ABCA1O95477 AL512604.3-201ENST00000569583 964 ntBASIC16.02■□□□□ 0.15
ABCA1O95477 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.02■□□□□ 0.15
ABCA1O95477 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ABCA1O95477 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ABCA1O95477 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.02■□□□□ 0.15
ABCA1O95477 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ABCA1O95477 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
ABCA1O95477 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ABCA1O95477 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ABCA1O95477 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
ABCA1O95477 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ABCA1O95477 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.01■□□□□ 0.15
ABCA1O95477 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ABCA1O95477 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.01■□□□□ 0.15
ABCA1O95477 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.01■□□□□ 0.15
ABCA1O95477 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ABCA1O95477 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.01■□□□□ 0.15
ABCA1O95477 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
ABCA1O95477 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
ABCA1O95477 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.01■□□□□ 0.15
ABCA1O95477 HYMAI.1-201ENST00000620949 238 ntBASIC16.01■□□□□ 0.15
ABCA1O95477 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
ABCA1O95477 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ABCA1O95477 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ABCA1O95477 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.01■□□□□ 0.15
ABCA1O95477 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.01■□□□□ 0.15
ABCA1O95477 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ABCA1O95477 AL512408.1-201ENST00000569378 2000 ntBASIC16.01■□□□□ 0.15
ABCA1O95477 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.01■□□□□ 0.15
ABCA1O95477 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ABCA1O95477 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
ABCA1O95477 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ABCA1O95477 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.01■□□□□ 0.15
ABCA1O95477 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ABCA1O95477 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ABCA1O95477 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ABCA1O95477 AL671277.2-201ENST00000458060 996 ntBASIC16.01■□□□□ 0.15
ABCA1O95477 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.01■□□□□ 0.15
ABCA1O95477 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
ABCA1O95477 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms