Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MIR5100-201ENST00000579544 119 ntBASIC8.57□□□□□ -1.04
USH2AO75445 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
USH2AO75445 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
USH2AO75445 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
USH2AO75445 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC8.56□□□□□ -1.04
USH2AO75445 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
USH2AO75445 HLA-V-201ENST00000429037 534 ntBASIC8.56□□□□□ -1.04
USH2AO75445 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC8.56□□□□□ -1.04
USH2AO75445 LITAF-220ENST00000620789 692 ntTSL 5 BASIC8.56□□□□□ -1.04
USH2AO75445 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
USH2AO75445 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
USH2AO75445 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
USH2AO75445 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
USH2AO75445 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
USH2AO75445 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
USH2AO75445 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
USH2AO75445 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC8.56□□□□□ -1.04
USH2AO75445 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
USH2AO75445 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC8.56□□□□□ -1.04
USH2AO75445 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC8.56□□□□□ -1.04
USH2AO75445 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC8.56□□□□□ -1.04
USH2AO75445 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
USH2AO75445 TUB-203ENST00000534099 1759 ntTSL 2 BASIC8.56□□□□□ -1.04
USH2AO75445 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
USH2AO75445 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
USH2AO75445 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC8.56□□□□□ -1.04
USH2AO75445 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
USH2AO75445 YBX2P1-201ENST00000394192 760 ntBASIC8.56□□□□□ -1.04
USH2AO75445 COX20P2-201ENST00000452636 358 ntBASIC8.56□□□□□ -1.04
USH2AO75445 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC8.56□□□□□ -1.04
USH2AO75445 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
USH2AO75445 DPP3P2-201ENST00000416030 1696 ntBASIC8.56□□□□□ -1.04
USH2AO75445 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
USH2AO75445 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC8.56□□□□□ -1.04
USH2AO75445 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
USH2AO75445 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC8.56□□□□□ -1.04
USH2AO75445 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
USH2AO75445 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC8.56□□□□□ -1.04
USH2AO75445 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
USH2AO75445 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
USH2AO75445 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC8.56□□□□□ -1.04
USH2AO75445 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
USH2AO75445 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
USH2AO75445 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC8.56□□□□□ -1.04
USH2AO75445 MIR3687-2-201ENST00000577708 61 ntBASIC8.56□□□□□ -1.04
USH2AO75445 BNIP3P18-201ENST00000593976 575 ntBASIC8.56□□□□□ -1.04
USH2AO75445 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
USH2AO75445 MIR3687-1-201ENST00000614492 61 ntBASIC8.56□□□□□ -1.04
USH2AO75445 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
USH2AO75445 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
USH2AO75445 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
USH2AO75445 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC8.55□□□□□ -1.04
USH2AO75445 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
USH2AO75445 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
USH2AO75445 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC8.55□□□□□ -1.04
USH2AO75445 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
USH2AO75445 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC8.55□□□□□ -1.04
USH2AO75445 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
USH2AO75445 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
USH2AO75445 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC8.55□□□□□ -1.04
USH2AO75445 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
USH2AO75445 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
USH2AO75445 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC8.55□□□□□ -1.04
USH2AO75445 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
USH2AO75445 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
USH2AO75445 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
USH2AO75445 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC8.55□□□□□ -1.04
USH2AO75445 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
USH2AO75445 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
USH2AO75445 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
USH2AO75445 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC8.55□□□□□ -1.04
USH2AO75445 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
USH2AO75445 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC8.55□□□□□ -1.04
USH2AO75445 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC8.55□□□□□ -1.04
USH2AO75445 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
USH2AO75445 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
USH2AO75445 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC8.55□□□□□ -1.04
USH2AO75445 MFF-203ENST00000349901 1716 ntTSL 2 BASIC8.55□□□□□ -1.04
USH2AO75445 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC8.55□□□□□ -1.04
USH2AO75445 ZNF259P1-201ENST00000407656 1365 ntBASIC8.55□□□□□ -1.04
USH2AO75445 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
USH2AO75445 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
USH2AO75445 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
USH2AO75445 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
USH2AO75445 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
USH2AO75445 ATP6V0CP3-201ENST00000417255 467 ntBASIC8.55□□□□□ -1.04
USH2AO75445 WDR53-203ENST00000429115 683 ntTSL 2 BASIC8.55□□□□□ -1.04
USH2AO75445 PAWRP1-201ENST00000451083 565 ntBASIC8.55□□□□□ -1.04
USH2AO75445 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
USH2AO75445 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC8.55□□□□□ -1.04
USH2AO75445 AC106028.4-201ENST00000614509 607 ntBASIC8.55□□□□□ -1.04
USH2AO75445 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
USH2AO75445 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
USH2AO75445 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
USH2AO75445 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
USH2AO75445 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC8.55□□□□□ -1.04
USH2AO75445 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
USH2AO75445 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
USH2AO75445 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC8.55□□□□□ -1.04
USH2AO75445 AF186996.4-201ENST00000467186 377 ntBASIC8.55□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms