Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRCH4O75427 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRCH4O75427 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRCH4O75427 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRCH4O75427 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LRCH4O75427 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
LRCH4O75427 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.95■□□□□ 0.78
LRCH4O75427 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRCH4O75427 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH4O75427 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.94■□□□□ 0.78
LRCH4O75427 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH4O75427 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
LRCH4O75427 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH4O75427 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH4O75427 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH4O75427 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH4O75427 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH4O75427 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH4O75427 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
LRCH4O75427 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH4O75427 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.94■□□□□ 0.78
LRCH4O75427 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.94■□□□□ 0.78
LRCH4O75427 RARRES2P10-201ENST00000564312 460 ntBASIC19.94■□□□□ 0.78
LRCH4O75427 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.94■□□□□ 0.78
LRCH4O75427 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.94■□□□□ 0.78
LRCH4O75427 TMEM191A-211ENST00000637163 1067 ntBASIC19.94■□□□□ 0.78
LRCH4O75427 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
LRCH4O75427 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH4O75427 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH4O75427 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH4O75427 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH4O75427 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH4O75427 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH4O75427 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
LRCH4O75427 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
LRCH4O75427 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH4O75427 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRCH4O75427 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRCH4O75427 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRCH4O75427 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.93■□□□□ 0.78
LRCH4O75427 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRCH4O75427 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.93■□□□□ 0.78
LRCH4O75427 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRCH4O75427 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
LRCH4O75427 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRCH4O75427 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRCH4O75427 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRCH4O75427 AL353807.1-201ENST00000427475 662 ntBASIC19.93■□□□□ 0.78
LRCH4O75427 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.93■□□□□ 0.78
LRCH4O75427 KSR1P1-201ENST00000446298 240 ntBASIC19.93■□□□□ 0.78
LRCH4O75427 FAM197Y4-202ENST00000622692 608 ntBASIC19.93■□□□□ 0.78
LRCH4O75427 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.93■□□□□ 0.78
LRCH4O75427 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRCH4O75427 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRCH4O75427 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRCH4O75427 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRCH4O75427 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.93■□□□□ 0.78
LRCH4O75427 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRCH4O75427 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.93■□□□□ 0.78
LRCH4O75427 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRCH4O75427 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRCH4O75427 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
LRCH4O75427 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRCH4O75427 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRCH4O75427 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRCH4O75427 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
LRCH4O75427 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
LRCH4O75427 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRCH4O75427 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRCH4O75427 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRCH4O75427 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRCH4O75427 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRCH4O75427 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.92■□□□□ 0.78
LRCH4O75427 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRCH4O75427 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
LRCH4O75427 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.92■□□□□ 0.78
LRCH4O75427 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRCH4O75427 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.92■□□□□ 0.78
LRCH4O75427 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRCH4O75427 AF186192.3-201ENST00000583427 947 ntBASIC19.92■□□□□ 0.78
LRCH4O75427 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
LRCH4O75427 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRCH4O75427 AC131212.4-201ENST00000623606 975 ntBASIC19.92■□□□□ 0.78
LRCH4O75427 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRCH4O75427 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
LRCH4O75427 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.92■□□□□ 0.78
LRCH4O75427 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRCH4O75427 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRCH4O75427 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRCH4O75427 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.91■□□□□ 0.78
LRCH4O75427 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRCH4O75427 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRCH4O75427 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRCH4O75427 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRCH4O75427 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.91■□□□□ 0.78
LRCH4O75427 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.91■□□□□ 0.78
LRCH4O75427 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.91■□□□□ 0.78
LRCH4O75427 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.91■□□□□ 0.78
LRCH4O75427 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.91■□□□□ 0.78
LRCH4O75427 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms