Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTP4A3O75365 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.27■□□□□ 0.35
PTP4A3O75365 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTP4A3O75365 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A3O75365 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A3O75365 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A3O75365 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A3O75365 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A3O75365 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.26■□□□□ 0.35
PTP4A3O75365 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.26■□□□□ 0.35
PTP4A3O75365 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.26■□□□□ 0.35
PTP4A3O75365 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.26■□□□□ 0.35
PTP4A3O75365 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A3O75365 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A3O75365 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.26■□□□□ 0.35
PTP4A3O75365 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A3O75365 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A3O75365 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.26■□□□□ 0.35
PTP4A3O75365 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.26■□□□□ 0.35
PTP4A3O75365 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A3O75365 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A3O75365 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A3O75365 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A3O75365 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A3O75365 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A3O75365 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A3O75365 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
PTP4A3O75365 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A3O75365 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
PTP4A3O75365 AC009113.1-201ENST00000570267 2443 ntBASIC17.26■□□□□ 0.35
PTP4A3O75365 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.25■□□□□ 0.35
PTP4A3O75365 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTP4A3O75365 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTP4A3O75365 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.25■□□□□ 0.35
PTP4A3O75365 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PTP4A3O75365 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTP4A3O75365 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTP4A3O75365 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.25■□□□□ 0.35
PTP4A3O75365 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.25■□□□□ 0.35
PTP4A3O75365 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PTP4A3O75365 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.25■□□□□ 0.35
PTP4A3O75365 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.25■□□□□ 0.35
PTP4A3O75365 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.25■□□□□ 0.35
PTP4A3O75365 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTP4A3O75365 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.25■□□□□ 0.35
PTP4A3O75365 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.25■□□□□ 0.35
PTP4A3O75365 AC008403.3-201ENST00000598924 454 ntBASIC17.25■□□□□ 0.35
PTP4A3O75365 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTP4A3O75365 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
PTP4A3O75365 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTP4A3O75365 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTP4A3O75365 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTP4A3O75365 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.25■□□□□ 0.35
PTP4A3O75365 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTP4A3O75365 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTP4A3O75365 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTP4A3O75365 WIZP1-201ENST00000531444 2299 ntBASIC17.24■□□□□ 0.35
PTP4A3O75365 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTP4A3O75365 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTP4A3O75365 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTP4A3O75365 AC104581.1-202ENST00000635932 2618 ntBASIC17.24■□□□□ 0.35
PTP4A3O75365 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PTP4A3O75365 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTP4A3O75365 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PTP4A3O75365 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PTP4A3O75365 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.24■□□□□ 0.35
PTP4A3O75365 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.24■□□□□ 0.35
PTP4A3O75365 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.24■□□□□ 0.35
PTP4A3O75365 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.24■□□□□ 0.35
PTP4A3O75365 AC092666.2-201ENST00000613287 246 ntBASIC17.24■□□□□ 0.35
PTP4A3O75365 HLA-A-209ENST00000638375 975 ntBASIC17.24■□□□□ 0.35
PTP4A3O75365 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTP4A3O75365 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTP4A3O75365 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTP4A3O75365 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTP4A3O75365 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.24■□□□□ 0.35
PTP4A3O75365 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PTP4A3O75365 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PTP4A3O75365 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A3O75365 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PTP4A3O75365 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A3O75365 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.23■□□□□ 0.35
PTP4A3O75365 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A3O75365 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.23■□□□□ 0.35
PTP4A3O75365 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A3O75365 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.23■□□□□ 0.35
PTP4A3O75365 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A3O75365 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A3O75365 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A3O75365 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PTP4A3O75365 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PTP4A3O75365 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A3O75365 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A3O75365 PRKY-204ENST00000533551 1019 ntBASIC17.23■□□□□ 0.35
PTP4A3O75365 AL160286.2-201ENST00000567150 934 ntBASIC17.23■□□□□ 0.35
PTP4A3O75365 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.23■□□□□ 0.35
PTP4A3O75365 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A3O75365 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A3O75365 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A3O75365 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms