Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
BRD4O60885 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
BRD4O60885 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC26.52■■□□□ 1.84
BRD4O60885 AC116562.4-201ENST00000641316 2276 ntBASIC26.51■■□□□ 1.84
BRD4O60885 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC26.51■■□□□ 1.83
BRD4O60885 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
BRD4O60885 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
BRD4O60885 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC26.51■■□□□ 1.83
BRD4O60885 CKBP1-201ENST00000565489 1086 ntBASIC26.51■■□□□ 1.83
BRD4O60885 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC26.51■■□□□ 1.83
BRD4O60885 DBP-204ENST00000599385 709 ntTSL 3 BASIC26.51■■□□□ 1.83
BRD4O60885 AC008622.2-201ENST00000617006 1229 ntBASIC26.51■■□□□ 1.83
BRD4O60885 AL121956.5-201ENST00000625261 221 ntBASIC26.51■■□□□ 1.83
BRD4O60885 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
BRD4O60885 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
BRD4O60885 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC26.51■■□□□ 1.83
BRD4O60885 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC26.51■■□□□ 1.83
BRD4O60885 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
BRD4O60885 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC26.5■■□□□ 1.83
BRD4O60885 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
BRD4O60885 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC26.5■■□□□ 1.83
BRD4O60885 HOMER2P1-201ENST00000455653 964 ntBASIC26.5■■□□□ 1.83
BRD4O60885 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC26.5■■□□□ 1.83
BRD4O60885 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC26.5■■□□□ 1.83
BRD4O60885 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
BRD4O60885 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
BRD4O60885 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
BRD4O60885 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
BRD4O60885 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC26.5■■□□□ 1.83
BRD4O60885 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
BRD4O60885 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC26.5■■□□□ 1.83
BRD4O60885 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
BRD4O60885 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
BRD4O60885 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
BRD4O60885 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
BRD4O60885 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
BRD4O60885 ANKRD20A18P-201ENST00000359341 492 ntBASIC26.49■■□□□ 1.83
BRD4O60885 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC26.49■■□□□ 1.83
BRD4O60885 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC26.49■■□□□ 1.83
BRD4O60885 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC26.49■■□□□ 1.83
BRD4O60885 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
BRD4O60885 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
BRD4O60885 KRT8P41-201ENST00000533985 1514 ntBASIC26.49■■□□□ 1.83
BRD4O60885 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC26.49■■□□□ 1.83
BRD4O60885 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC26.49■■□□□ 1.83
BRD4O60885 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC26.49■■□□□ 1.83
BRD4O60885 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
BRD4O60885 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
BRD4O60885 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC26.48■■□□□ 1.83
BRD4O60885 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC26.48■■□□□ 1.83
BRD4O60885 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC26.48■■□□□ 1.83
BRD4O60885 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC26.48■■□□□ 1.83
BRD4O60885 UPK3BP1-201ENST00000428678 509 ntBASIC26.48■■□□□ 1.83
BRD4O60885 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC26.48■■□□□ 1.83
BRD4O60885 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC26.48■■□□□ 1.83
BRD4O60885 AC093484.2-201ENST00000580996 2166 ntBASIC26.48■■□□□ 1.83
BRD4O60885 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC26.48■■□□□ 1.83
BRD4O60885 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
BRD4O60885 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC26.48■■□□□ 1.83
BRD4O60885 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC26.48■■□□□ 1.83
BRD4O60885 AP000550.4-202ENST00000639755 178 ntBASIC26.48■■□□□ 1.83
BRD4O60885 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
BRD4O60885 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
BRD4O60885 TP73-202ENST00000354437 2140 ntTSL 5 BASIC26.48■■□□□ 1.83
BRD4O60885 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
BRD4O60885 Z82202.1-201ENST00000623446 1880 ntBASIC26.48■■□□□ 1.83
BRD4O60885 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC26.48■■□□□ 1.83
BRD4O60885 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
BRD4O60885 MED25-212ENST00000618715 1467 ntTSL 5 BASIC26.47■■□□□ 1.83
BRD4O60885 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
BRD4O60885 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC26.47■■□□□ 1.83
BRD4O60885 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
BRD4O60885 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC26.47■■□□□ 1.83
BRD4O60885 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC26.47■■□□□ 1.83
BRD4O60885 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC26.47■■□□□ 1.83
BRD4O60885 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC26.47■■□□□ 1.83
BRD4O60885 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC26.47■■□□□ 1.83
BRD4O60885 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC26.47■■□□□ 1.83
BRD4O60885 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
BRD4O60885 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
BRD4O60885 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
BRD4O60885 AC007952.6-201ENST00000573168 2673 ntBASIC26.47■■□□□ 1.83
BRD4O60885 AC003957.1-201ENST00000625108 2673 ntBASIC26.47■■□□□ 1.83
BRD4O60885 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC26.47■■□□□ 1.83
BRD4O60885 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
BRD4O60885 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
BRD4O60885 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
BRD4O60885 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
BRD4O60885 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
BRD4O60885 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC26.47■■□□□ 1.83
BRD4O60885 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC26.47■■□□□ 1.83
BRD4O60885 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC26.47■■□□□ 1.83
BRD4O60885 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
BRD4O60885 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
BRD4O60885 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
BRD4O60885 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC26.46■■□□□ 1.83
BRD4O60885 CD70-202ENST00000423145 881 ntTSL 2 BASIC26.46■■□□□ 1.83
BRD4O60885 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC26.46■■□□□ 1.83
BRD4O60885 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
BRD4O60885 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms