Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC24.16■■□□□ 1.46
CACNA1FO60840 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC24.16■■□□□ 1.46
CACNA1FO60840 TMA16-209ENST00000513272 803 ntTSL 2 BASIC24.16■■□□□ 1.46
CACNA1FO60840 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC24.16■■□□□ 1.46
CACNA1FO60840 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC24.16■■□□□ 1.46
CACNA1FO60840 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CACNA1FO60840 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
CACNA1FO60840 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
CACNA1FO60840 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
CACNA1FO60840 IRX1P1-201ENST00000438849 1838 ntBASIC24.16■■□□□ 1.46
CACNA1FO60840 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CACNA1FO60840 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CACNA1FO60840 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
CACNA1FO60840 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
CACNA1FO60840 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC24.16■■□□□ 1.46
CACNA1FO60840 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
CACNA1FO60840 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC24.16■■□□□ 1.46
CACNA1FO60840 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC24.16■■□□□ 1.46
CACNA1FO60840 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CACNA1FO60840 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC24.16■■□□□ 1.46
CACNA1FO60840 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC24.16■■□□□ 1.46
CACNA1FO60840 AC116562.4-202ENST00000641738 218 ntBASIC24.16■■□□□ 1.46
CACNA1FO60840 SLC25A24-204ENST00000569674 2357 ntBASIC24.16■■□□□ 1.46
CACNA1FO60840 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC24.15■■□□□ 1.46
CACNA1FO60840 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CACNA1FO60840 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CACNA1FO60840 AC092338.2-201ENST00000568827 1415 ntBASIC24.15■■□□□ 1.46
CACNA1FO60840 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CACNA1FO60840 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CACNA1FO60840 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC24.15■■□□□ 1.46
CACNA1FO60840 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC24.15■■□□□ 1.46
CACNA1FO60840 HEIH-201ENST00000623091 1652 ntBASIC24.15■■□□□ 1.46
CACNA1FO60840 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CACNA1FO60840 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CACNA1FO60840 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CACNA1FO60840 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CACNA1FO60840 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CACNA1FO60840 FEM1AP3-201ENST00000403722 1741 ntBASIC24.14■■□□□ 1.46
CACNA1FO60840 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CACNA1FO60840 NEK4P2-201ENST00000580004 1012 ntBASIC24.14■■□□□ 1.46
CACNA1FO60840 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.46
CACNA1FO60840 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.46
CACNA1FO60840 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC24.14■■□□□ 1.46
CACNA1FO60840 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CACNA1FO60840 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
CACNA1FO60840 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
CACNA1FO60840 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CACNA1FO60840 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CACNA1FO60840 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CACNA1FO60840 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC24.14■■□□□ 1.45
CACNA1FO60840 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC24.14■■□□□ 1.45
CACNA1FO60840 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
CACNA1FO60840 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CACNA1FO60840 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC24.13■■□□□ 1.45
CACNA1FO60840 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC24.13■■□□□ 1.45
CACNA1FO60840 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC24.13■■□□□ 1.45
CACNA1FO60840 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC24.13■■□□□ 1.45
CACNA1FO60840 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC24.13■■□□□ 1.45
CACNA1FO60840 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC24.13■■□□□ 1.45
CACNA1FO60840 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
CACNA1FO60840 KRT8P45-201ENST00000414328 1447 ntBASIC24.13■■□□□ 1.45
CACNA1FO60840 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC24.12■■□□□ 1.45
CACNA1FO60840 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC24.12■■□□□ 1.45
CACNA1FO60840 KRT18P57-201ENST00000443599 1254 ntBASIC24.12■■□□□ 1.45
CACNA1FO60840 AC009947.2-201ENST00000444014 672 ntBASIC24.12■■□□□ 1.45
CACNA1FO60840 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC24.12■■□□□ 1.45
CACNA1FO60840 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC24.12■■□□□ 1.45
CACNA1FO60840 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CACNA1FO60840 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CACNA1FO60840 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC24.12■■□□□ 1.45
CACNA1FO60840 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC24.12■■□□□ 1.45
CACNA1FO60840 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CACNA1FO60840 GPAT2P1-201ENST00000444924 1672 ntBASIC24.11■■□□□ 1.45
CACNA1FO60840 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CACNA1FO60840 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CACNA1FO60840 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CACNA1FO60840 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CACNA1FO60840 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CACNA1FO60840 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CACNA1FO60840 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC24.11■■□□□ 1.45
CACNA1FO60840 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
CACNA1FO60840 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
CACNA1FO60840 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC24.11■■□□□ 1.45
CACNA1FO60840 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CACNA1FO60840 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CACNA1FO60840 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
CACNA1FO60840 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC24.11■■□□□ 1.45
CACNA1FO60840 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC24.11■■□□□ 1.45
CACNA1FO60840 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CACNA1FO60840 AL161938.1-201ENST00000569833 2180 ntBASIC24.11■■□□□ 1.45
CACNA1FO60840 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC24.11■■□□□ 1.45
CACNA1FO60840 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CACNA1FO60840 AC007952.6-201ENST00000573168 2673 ntBASIC24.11■■□□□ 1.45
CACNA1FO60840 AC003957.1-201ENST00000625108 2673 ntBASIC24.11■■□□□ 1.45
CACNA1FO60840 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
CACNA1FO60840 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CACNA1FO60840 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC24.1■■□□□ 1.45
CACNA1FO60840 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC24.1■■□□□ 1.45
CACNA1FO60840 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
CACNA1FO60840 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms