Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
GFRA3O60609 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.63■□□□□ 0.57
GFRA3O60609 AC008608.2-201ENST00000606089 416 ntBASIC18.63■□□□□ 0.57
GFRA3O60609 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.63■□□□□ 0.57
GFRA3O60609 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GFRA3O60609 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GFRA3O60609 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
GFRA3O60609 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.63■□□□□ 0.57
GFRA3O60609 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GFRA3O60609 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.63■□□□□ 0.57
GFRA3O60609 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GFRA3O60609 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
GFRA3O60609 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.62■□□□□ 0.57
GFRA3O60609 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.62■□□□□ 0.57
GFRA3O60609 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GFRA3O60609 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GFRA3O60609 RPS2P28-201ENST00000314255 741 ntBASIC18.62■□□□□ 0.57
GFRA3O60609 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GFRA3O60609 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.62■□□□□ 0.57
GFRA3O60609 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GFRA3O60609 KRT18P3-201ENST00000451602 1288 ntBASIC18.62■□□□□ 0.57
GFRA3O60609 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.62■□□□□ 0.57
GFRA3O60609 SEC1P-202ENST00000473944 940 ntBASIC18.62■□□□□ 0.57
GFRA3O60609 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.62■□□□□ 0.57
GFRA3O60609 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.62■□□□□ 0.57
GFRA3O60609 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GFRA3O60609 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.62■□□□□ 0.57
GFRA3O60609 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.62■□□□□ 0.57
GFRA3O60609 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.62■□□□□ 0.57
GFRA3O60609 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
GFRA3O60609 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
GFRA3O60609 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GFRA3O60609 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GFRA3O60609 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.62■□□□□ 0.57
GFRA3O60609 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GFRA3O60609 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GFRA3O60609 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GFRA3O60609 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.62■□□□□ 0.57
GFRA3O60609 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.62■□□□□ 0.57
GFRA3O60609 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
GFRA3O60609 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.61■□□□□ 0.57
GFRA3O60609 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GFRA3O60609 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GFRA3O60609 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.61■□□□□ 0.57
GFRA3O60609 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.61■□□□□ 0.57
GFRA3O60609 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
GFRA3O60609 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
GFRA3O60609 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
GFRA3O60609 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.61■□□□□ 0.57
GFRA3O60609 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
GFRA3O60609 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.61■□□□□ 0.57
GFRA3O60609 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GFRA3O60609 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.61■□□□□ 0.57
GFRA3O60609 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.61■□□□□ 0.57
GFRA3O60609 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.61■□□□□ 0.57
GFRA3O60609 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.61■□□□□ 0.57
GFRA3O60609 MINOS1P3-201ENST00000457048 203 ntBASIC18.61■□□□□ 0.57
GFRA3O60609 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
GFRA3O60609 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GFRA3O60609 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.61■□□□□ 0.57
GFRA3O60609 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.61■□□□□ 0.57
GFRA3O60609 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
GFRA3O60609 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.61■□□□□ 0.57
GFRA3O60609 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GFRA3O60609 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GFRA3O60609 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
GFRA3O60609 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.61■□□□□ 0.57
GFRA3O60609 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GFRA3O60609 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GFRA3O60609 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GFRA3O60609 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
GFRA3O60609 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
GFRA3O60609 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GFRA3O60609 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GFRA3O60609 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GFRA3O60609 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GFRA3O60609 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GFRA3O60609 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.6■□□□□ 0.57
GFRA3O60609 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.6■□□□□ 0.57
GFRA3O60609 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.6■□□□□ 0.57
GFRA3O60609 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.6■□□□□ 0.57
GFRA3O60609 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.6■□□□□ 0.57
GFRA3O60609 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.6■□□□□ 0.57
GFRA3O60609 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.6■□□□□ 0.57
GFRA3O60609 AL591684.3-201ENST00000605187 298 ntBASIC18.6■□□□□ 0.57
GFRA3O60609 AL596442.2-201ENST00000610240 980 ntBASIC18.6■□□□□ 0.57
GFRA3O60609 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GFRA3O60609 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GFRA3O60609 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GFRA3O60609 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GFRA3O60609 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
GFRA3O60609 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GFRA3O60609 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
GFRA3O60609 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GFRA3O60609 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.6■□□□□ 0.57
GFRA3O60609 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
GFRA3O60609 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GFRA3O60609 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.59■□□□□ 0.57
GFRA3O60609 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GFRA3O60609 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms