Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNT1O60563 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNT1O60563 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.78■■□□□ 1.08
CCNT1O60563 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.78■■□□□ 1.08
CCNT1O60563 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.78■■□□□ 1.08
CCNT1O60563 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.78■■□□□ 1.08
CCNT1O60563 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.78■■□□□ 1.08
CCNT1O60563 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
CCNT1O60563 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNT1O60563 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNT1O60563 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNT1O60563 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CCNT1O60563 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNT1O60563 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNT1O60563 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CCNT1O60563 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNT1O60563 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CCNT1O60563 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CCNT1O60563 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCNT1O60563 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNT1O60563 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
CCNT1O60563 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.77■■□□□ 1.08
CCNT1O60563 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.77■■□□□ 1.08
CCNT1O60563 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCNT1O60563 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCNT1O60563 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.77■■□□□ 1.08
CCNT1O60563 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.77■■□□□ 1.08
CCNT1O60563 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.77■■□□□ 1.08
CCNT1O60563 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.77■■□□□ 1.08
CCNT1O60563 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.77■■□□□ 1.08
CCNT1O60563 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CCNT1O60563 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CCNT1O60563 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CCNT1O60563 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
CCNT1O60563 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.76■■□□□ 1.07
CCNT1O60563 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.76■■□□□ 1.07
CCNT1O60563 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNT1O60563 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCNT1O60563 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNT1O60563 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCNT1O60563 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.76■■□□□ 1.07
CCNT1O60563 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNT1O60563 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.76■■□□□ 1.07
CCNT1O60563 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.76■■□□□ 1.07
CCNT1O60563 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.76■■□□□ 1.07
CCNT1O60563 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.76■■□□□ 1.07
CCNT1O60563 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCNT1O60563 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNT1O60563 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.75■■□□□ 1.07
CCNT1O60563 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.75■■□□□ 1.07
CCNT1O60563 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCNT1O60563 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCNT1O60563 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CCNT1O60563 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.75■■□□□ 1.07
CCNT1O60563 TSPY21P-201ENST00000433481 731 ntBASIC21.75■■□□□ 1.07
CCNT1O60563 TSPY23P-201ENST00000440136 739 ntBASIC21.75■■□□□ 1.07
CCNT1O60563 FAM207BP-201ENST00000447172 505 ntBASIC21.75■■□□□ 1.07
CCNT1O60563 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.75■■□□□ 1.07
CCNT1O60563 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CCNT1O60563 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCNT1O60563 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCNT1O60563 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCNT1O60563 KRT17P2-201ENST00000300992 1314 ntBASIC21.75■■□□□ 1.07
CCNT1O60563 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.75■■□□□ 1.07
CCNT1O60563 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.75■■□□□ 1.07
CCNT1O60563 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CCNT1O60563 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CCNT1O60563 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CCNT1O60563 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCNT1O60563 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CCNT1O60563 KRT8P11-201ENST00000409686 1436 ntBASIC21.74■■□□□ 1.07
CCNT1O60563 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.74■■□□□ 1.07
CCNT1O60563 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
CCNT1O60563 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.74■■□□□ 1.07
CCNT1O60563 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCNT1O60563 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.74■■□□□ 1.07
CCNT1O60563 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.74■■□□□ 1.07
CCNT1O60563 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCNT1O60563 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CCNT1O60563 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCNT1O60563 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.74■■□□□ 1.07
CCNT1O60563 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCNT1O60563 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCNT1O60563 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCNT1O60563 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.73■■□□□ 1.07
CCNT1O60563 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.73■■□□□ 1.07
CCNT1O60563 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCNT1O60563 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCNT1O60563 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCNT1O60563 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.73■■□□□ 1.07
CCNT1O60563 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCNT1O60563 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CCNT1O60563 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCNT1O60563 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.73■■□□□ 1.07
CCNT1O60563 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.73■■□□□ 1.07
CCNT1O60563 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.73■■□□□ 1.07
CCNT1O60563 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.73■■□□□ 1.07
CCNT1O60563 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCNT1O60563 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CCNT1O60563 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms