Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXD2O60548 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
FOXD2O60548 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXD2O60548 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXD2O60548 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXD2O60548 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXD2O60548 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.25■□□□□ 0.67
FOXD2O60548 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.25■□□□□ 0.67
FOXD2O60548 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.25■□□□□ 0.67
FOXD2O60548 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXD2O60548 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FOXD2O60548 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXD2O60548 PTBP1P-201ENST00000554374 1601 ntBASIC19.25■□□□□ 0.67
FOXD2O60548 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXD2O60548 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FOXD2O60548 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
FOXD2O60548 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.25■□□□□ 0.67
FOXD2O60548 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXD2O60548 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
FOXD2O60548 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FOXD2O60548 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXD2O60548 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.24■□□□□ 0.67
FOXD2O60548 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXD2O60548 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXD2O60548 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.24■□□□□ 0.67
FOXD2O60548 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
FOXD2O60548 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXD2O60548 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
FOXD2O60548 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXD2O60548 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.24■□□□□ 0.67
FOXD2O60548 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXD2O60548 AC004870.1-201ENST00000315132 882 ntBASIC19.24■□□□□ 0.67
FOXD2O60548 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXD2O60548 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
FOXD2O60548 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FOXD2O60548 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.24■□□□□ 0.67
FOXD2O60548 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.24■□□□□ 0.67
FOXD2O60548 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.24■□□□□ 0.67
FOXD2O60548 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.24■□□□□ 0.67
FOXD2O60548 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
FOXD2O60548 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.24■□□□□ 0.67
FOXD2O60548 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXD2O60548 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXD2O60548 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXD2O60548 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.24■□□□□ 0.67
FOXD2O60548 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.24■□□□□ 0.67
FOXD2O60548 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.24■□□□□ 0.67
FOXD2O60548 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
FOXD2O60548 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXD2O60548 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.23■□□□□ 0.67
FOXD2O60548 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXD2O60548 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXD2O60548 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
FOXD2O60548 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.23■□□□□ 0.67
FOXD2O60548 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXD2O60548 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXD2O60548 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXD2O60548 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FOXD2O60548 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
FOXD2O60548 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FOXD2O60548 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.23■□□□□ 0.67
FOXD2O60548 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.23■□□□□ 0.67
FOXD2O60548 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
FOXD2O60548 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
FOXD2O60548 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.23■□□□□ 0.67
FOXD2O60548 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.23■□□□□ 0.67
FOXD2O60548 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.23■□□□□ 0.67
FOXD2O60548 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXD2O60548 KRT8P17-201ENST00000453110 1448 ntBASIC19.23■□□□□ 0.67
FOXD2O60548 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
FOXD2O60548 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXD2O60548 AC098818.2-201ENST00000564925 2320 ntBASIC19.23■□□□□ 0.67
FOXD2O60548 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXD2O60548 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FOXD2O60548 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.23■□□□□ 0.67
FOXD2O60548 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXD2O60548 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXD2O60548 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXD2O60548 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXD2O60548 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
FOXD2O60548 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXD2O60548 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXD2O60548 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXD2O60548 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXD2O60548 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXD2O60548 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXD2O60548 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.22■□□□□ 0.67
FOXD2O60548 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.22■□□□□ 0.67
FOXD2O60548 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXD2O60548 ZNF444P1-201ENST00000559497 298 ntBASIC19.22■□□□□ 0.67
FOXD2O60548 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.22■□□□□ 0.67
FOXD2O60548 AC111152.3-201ENST00000569699 673 ntBASIC19.22■□□□□ 0.67
FOXD2O60548 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.22■□□□□ 0.67
FOXD2O60548 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
FOXD2O60548 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXD2O60548 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXD2O60548 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXD2O60548 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXD2O60548 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXD2O60548 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms