Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DLX3O60479 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DLX3O60479 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DLX3O60479 AC005082.1-201ENST00000413042 2259 ntBASIC18.8■□□□□ 0.6
DLX3O60479 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
DLX3O60479 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.8■□□□□ 0.6
DLX3O60479 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
DLX3O60479 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DLX3O60479 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DLX3O60479 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DLX3O60479 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DLX3O60479 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
DLX3O60479 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
DLX3O60479 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.79■□□□□ 0.6
DLX3O60479 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DLX3O60479 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DLX3O60479 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
DLX3O60479 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DLX3O60479 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DLX3O60479 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
DLX3O60479 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.79■□□□□ 0.6
DLX3O60479 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.79■□□□□ 0.6
DLX3O60479 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
DLX3O60479 AC008687.6-201ENST00000596318 630 ntBASIC18.79■□□□□ 0.6
DLX3O60479 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DLX3O60479 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
DLX3O60479 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DLX3O60479 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DLX3O60479 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
DLX3O60479 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DLX3O60479 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DLX3O60479 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.79■□□□□ 0.6
DLX3O60479 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
DLX3O60479 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
DLX3O60479 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
DLX3O60479 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DLX3O60479 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DLX3O60479 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
DLX3O60479 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DLX3O60479 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
DLX3O60479 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DLX3O60479 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.78■□□□□ 0.6
DLX3O60479 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DLX3O60479 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
DLX3O60479 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DLX3O60479 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DLX3O60479 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.78■□□□□ 0.6
DLX3O60479 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.78■□□□□ 0.6
DLX3O60479 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
DLX3O60479 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.78■□□□□ 0.6
DLX3O60479 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.78■□□□□ 0.6
DLX3O60479 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
DLX3O60479 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
DLX3O60479 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
DLX3O60479 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DLX3O60479 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DLX3O60479 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.77■□□□□ 0.6
DLX3O60479 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
DLX3O60479 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DLX3O60479 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DLX3O60479 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
DLX3O60479 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.77■□□□□ 0.6
DLX3O60479 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
DLX3O60479 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DLX3O60479 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DLX3O60479 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DLX3O60479 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DLX3O60479 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
DLX3O60479 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.77■□□□□ 0.6
DLX3O60479 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DLX3O60479 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.77■□□□□ 0.6
DLX3O60479 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.77■□□□□ 0.6
DLX3O60479 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DLX3O60479 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DLX3O60479 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
DLX3O60479 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DLX3O60479 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DLX3O60479 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
DLX3O60479 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
DLX3O60479 AC135050.7-201ENST00000624508 2218 ntBASIC18.77■□□□□ 0.59
DLX3O60479 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
DLX3O60479 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.59
DLX3O60479 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.77■□□□□ 0.59
DLX3O60479 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.76■□□□□ 0.59
DLX3O60479 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.76■□□□□ 0.59
DLX3O60479 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DLX3O60479 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
DLX3O60479 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
DLX3O60479 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DLX3O60479 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.76■□□□□ 0.59
DLX3O60479 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DLX3O60479 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DLX3O60479 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DLX3O60479 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DLX3O60479 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
DLX3O60479 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.76■□□□□ 0.59
DLX3O60479 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.76■□□□□ 0.59
DLX3O60479 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DLX3O60479 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DLX3O60479 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms