Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
URB1O60287 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.08■□□□□ 0.48
URB1O60287 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
URB1O60287 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
URB1O60287 AC106795.1-205ENST00000512851 1056 ntBASIC18.07■□□□□ 0.48
URB1O60287 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
URB1O60287 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
URB1O60287 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.07■□□□□ 0.48
URB1O60287 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
URB1O60287 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
URB1O60287 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.07■□□□□ 0.48
URB1O60287 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.07■□□□□ 0.48
URB1O60287 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.07■□□□□ 0.48
URB1O60287 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
URB1O60287 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
URB1O60287 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
URB1O60287 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
URB1O60287 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
URB1O60287 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
URB1O60287 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
URB1O60287 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
URB1O60287 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
URB1O60287 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.07■□□□□ 0.48
URB1O60287 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.07■□□□□ 0.48
URB1O60287 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
URB1O60287 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
URB1O60287 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
URB1O60287 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.06■□□□□ 0.48
URB1O60287 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.06■□□□□ 0.48
URB1O60287 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
URB1O60287 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.06■□□□□ 0.48
URB1O60287 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.06■□□□□ 0.48
URB1O60287 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
URB1O60287 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
URB1O60287 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
URB1O60287 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
URB1O60287 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
URB1O60287 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
URB1O60287 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
URB1O60287 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.06■□□□□ 0.48
URB1O60287 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
URB1O60287 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
URB1O60287 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.06■□□□□ 0.48
URB1O60287 AC012615.1-201ENST00000565797 1299 ntBASIC18.06■□□□□ 0.48
URB1O60287 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.06■□□□□ 0.48
URB1O60287 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
URB1O60287 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
URB1O60287 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.06■□□□□ 0.48
URB1O60287 AL391422.3-201ENST00000603791 2761 ntBASIC18.06■□□□□ 0.48
URB1O60287 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
URB1O60287 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
URB1O60287 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.05■□□□□ 0.48
URB1O60287 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
URB1O60287 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.05■□□□□ 0.48
URB1O60287 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.05■□□□□ 0.48
URB1O60287 BX640515.1-201ENST00000617215 977 ntBASIC18.05■□□□□ 0.48
URB1O60287 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
URB1O60287 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.05■□□□□ 0.48
URB1O60287 AL137060.1-201ENST00000618151 2648 ntBASIC18.05■□□□□ 0.48
URB1O60287 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
URB1O60287 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
URB1O60287 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
URB1O60287 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
URB1O60287 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
URB1O60287 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
URB1O60287 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
URB1O60287 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
URB1O60287 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
URB1O60287 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.05■□□□□ 0.48
URB1O60287 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.05■□□□□ 0.48
URB1O60287 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.05■□□□□ 0.48
URB1O60287 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.05■□□□□ 0.48
URB1O60287 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.05■□□□□ 0.48
URB1O60287 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.05■□□□□ 0.48
URB1O60287 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
URB1O60287 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
URB1O60287 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
URB1O60287 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
URB1O60287 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.04■□□□□ 0.48
URB1O60287 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.04■□□□□ 0.48
URB1O60287 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
URB1O60287 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
URB1O60287 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.04■□□□□ 0.48
URB1O60287 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.04■□□□□ 0.48
URB1O60287 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
URB1O60287 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.04■□□□□ 0.48
URB1O60287 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.04■□□□□ 0.48
URB1O60287 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
URB1O60287 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
URB1O60287 KRT8P8-201ENST00000434750 1448 ntBASIC18.04■□□□□ 0.48
URB1O60287 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
URB1O60287 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.04■□□□□ 0.48
URB1O60287 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
URB1O60287 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
URB1O60287 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
URB1O60287 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
URB1O60287 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
URB1O60287 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
URB1O60287 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.03■□□□□ 0.48
URB1O60287 KRT18P31-201ENST00000506277 1292 ntBASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms