Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.45■□□□□ 0.7
KDELR3O43731 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.45■□□□□ 0.7
KDELR3O43731 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.45■□□□□ 0.7
KDELR3O43731 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.45■□□□□ 0.7
KDELR3O43731 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KDELR3O43731 CYP2D8P-201ENST00000433633 1490 ntBASIC19.45■□□□□ 0.7
KDELR3O43731 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KDELR3O43731 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KDELR3O43731 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
KDELR3O43731 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KDELR3O43731 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.45■□□□□ 0.7
KDELR3O43731 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.45■□□□□ 0.7
KDELR3O43731 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KDELR3O43731 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.45■□□□□ 0.7
KDELR3O43731 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.44■□□□□ 0.7
KDELR3O43731 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
KDELR3O43731 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KDELR3O43731 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KDELR3O43731 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
KDELR3O43731 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KDELR3O43731 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KDELR3O43731 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
KDELR3O43731 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.44■□□□□ 0.7
KDELR3O43731 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.44■□□□□ 0.7
KDELR3O43731 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
KDELR3O43731 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
KDELR3O43731 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
KDELR3O43731 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
KDELR3O43731 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KDELR3O43731 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KDELR3O43731 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KDELR3O43731 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.44■□□□□ 0.7
KDELR3O43731 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
KDELR3O43731 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KDELR3O43731 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.43■□□□□ 0.7
KDELR3O43731 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KDELR3O43731 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
KDELR3O43731 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
KDELR3O43731 FEM1AP3-201ENST00000403722 1741 ntBASIC19.43■□□□□ 0.7
KDELR3O43731 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
KDELR3O43731 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
KDELR3O43731 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.43■□□□□ 0.7
KDELR3O43731 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KDELR3O43731 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.43■□□□□ 0.7
KDELR3O43731 NAPSB-206ENST00000562112 1266 ntBASIC19.43■□□□□ 0.7
KDELR3O43731 C2orf69P3-201ENST00000565542 1120 ntBASIC19.43■□□□□ 0.7
KDELR3O43731 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KDELR3O43731 AC010947.1-201ENST00000623454 693 ntBASIC19.43■□□□□ 0.7
KDELR3O43731 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
KDELR3O43731 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.43■□□□□ 0.7
KDELR3O43731 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KDELR3O43731 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.43■□□□□ 0.7
KDELR3O43731 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KDELR3O43731 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KDELR3O43731 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
KDELR3O43731 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
KDELR3O43731 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.43■□□□□ 0.7
KDELR3O43731 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
KDELR3O43731 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
KDELR3O43731 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.43■□□□□ 0.7
KDELR3O43731 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KDELR3O43731 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.42■□□□□ 0.7
KDELR3O43731 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
KDELR3O43731 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KDELR3O43731 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
KDELR3O43731 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
KDELR3O43731 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
KDELR3O43731 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KDELR3O43731 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KDELR3O43731 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
KDELR3O43731 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KDELR3O43731 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.42■□□□□ 0.7
KDELR3O43731 IRX1P1-201ENST00000438849 1838 ntBASIC19.42■□□□□ 0.7
KDELR3O43731 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KDELR3O43731 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KDELR3O43731 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KDELR3O43731 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.42■□□□□ 0.7
KDELR3O43731 CA15P1-201ENST00000481698 905 ntBASIC19.42■□□□□ 0.7
KDELR3O43731 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.42■□□□□ 0.7
KDELR3O43731 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.42■□□□□ 0.7
KDELR3O43731 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KDELR3O43731 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
KDELR3O43731 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KDELR3O43731 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KDELR3O43731 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.42■□□□□ 0.7
KDELR3O43731 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KDELR3O43731 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KDELR3O43731 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KDELR3O43731 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.42■□□□□ 0.7
KDELR3O43731 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.42■□□□□ 0.7
KDELR3O43731 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KDELR3O43731 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KDELR3O43731 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.41■□□□□ 0.7
KDELR3O43731 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
KDELR3O43731 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
KDELR3O43731 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KDELR3O43731 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KDELR3O43731 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
KDELR3O43731 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.41■□□□□ 0.7
KDELR3O43731 FP475955.4-201ENST00000623131 1990 ntBASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms