Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
PAX4O43316 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC13.69□□□□□ -0.22
PAX4O43316 TREX1-205ENST00000625293 1783 ntBASIC13.69□□□□□ -0.22
PAX4O43316 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PAX4O43316 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PAX4O43316 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PAX4O43316 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PAX4O43316 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
PAX4O43316 ISG20-202ENST00000379224 540 ntTSL 3 BASIC13.69□□□□□ -0.22
PAX4O43316 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC13.69□□□□□ -0.22
PAX4O43316 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PAX4O43316 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
PAX4O43316 F2R-202ENST00000505600 442 ntTSL 2 BASIC13.69□□□□□ -0.22
PAX4O43316 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PAX4O43316 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC13.69□□□□□ -0.22
PAX4O43316 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PAX4O43316 AC110285.5-201ENST00000611501 352 ntBASIC13.69□□□□□ -0.22
PAX4O43316 MMD2-204ENST00000612910 778 ntTSL 5 BASIC13.69□□□□□ -0.22
PAX4O43316 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC13.69□□□□□ -0.22
PAX4O43316 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PAX4O43316 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PAX4O43316 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PAX4O43316 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PAX4O43316 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC13.69□□□□□ -0.22
PAX4O43316 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PAX4O43316 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
PAX4O43316 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PAX4O43316 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PAX4O43316 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
PAX4O43316 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PAX4O43316 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PAX4O43316 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PAX4O43316 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
PAX4O43316 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PAX4O43316 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC13.68□□□□□ -0.22
PAX4O43316 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PAX4O43316 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PAX4O43316 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC13.68□□□□□ -0.22
PAX4O43316 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PAX4O43316 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PAX4O43316 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PAX4O43316 NME1-207ENST00000480143 964 ntTSL 2 BASIC13.68□□□□□ -0.22
PAX4O43316 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
PAX4O43316 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC13.68□□□□□ -0.22
PAX4O43316 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PAX4O43316 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
PAX4O43316 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
PAX4O43316 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PAX4O43316 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PAX4O43316 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
PAX4O43316 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PAX4O43316 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
PAX4O43316 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PAX4O43316 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PAX4O43316 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PAX4O43316 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PAX4O43316 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PAX4O43316 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PAX4O43316 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PAX4O43316 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC13.67□□□□□ -0.22
PAX4O43316 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC13.67□□□□□ -0.22
PAX4O43316 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC13.67□□□□□ -0.22
PAX4O43316 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PAX4O43316 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PAX4O43316 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
PAX4O43316 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC13.67□□□□□ -0.22
PAX4O43316 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PAX4O43316 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC13.67□□□□□ -0.22
PAX4O43316 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PAX4O43316 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PAX4O43316 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC13.67□□□□□ -0.22
PAX4O43316 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PAX4O43316 KRT16P5-201ENST00000455284 522 ntBASIC13.67□□□□□ -0.22
PAX4O43316 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC13.67□□□□□ -0.22
PAX4O43316 AC124016.1-201ENST00000609552 612 ntBASIC13.67□□□□□ -0.22
PAX4O43316 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC13.67□□□□□ -0.22
PAX4O43316 CABP2-204ENST00000636477 941 ntTSL 5 BASIC13.67□□□□□ -0.22
PAX4O43316 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PAX4O43316 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PAX4O43316 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC13.67□□□□□ -0.22
PAX4O43316 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
PAX4O43316 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PAX4O43316 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
PAX4O43316 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
PAX4O43316 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PAX4O43316 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC13.67□□□□□ -0.22
PAX4O43316 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PAX4O43316 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PAX4O43316 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13.67□□□□□ -0.22
PAX4O43316 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
PAX4O43316 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
PAX4O43316 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PAX4O43316 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PAX4O43316 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PAX4O43316 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC13.66□□□□□ -0.22
PAX4O43316 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PAX4O43316 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PAX4O43316 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC13.66□□□□□ -0.22
PAX4O43316 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PAX4O43316 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms