Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC120114.3-201ENST00000611923 658 ntBASIC22.89■■□□□ 1.25
FOXN1O15353 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
FOXN1O15353 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
FOXN1O15353 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
FOXN1O15353 KRT8P8-201ENST00000434750 1448 ntBASIC22.89■■□□□ 1.25
FOXN1O15353 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC22.89■■□□□ 1.25
FOXN1O15353 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC22.89■■□□□ 1.25
FOXN1O15353 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
FOXN1O15353 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
FOXN1O15353 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
FOXN1O15353 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC22.89■■□□□ 1.25
FOXN1O15353 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
FOXN1O15353 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
FOXN1O15353 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
FOXN1O15353 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.88■■□□□ 1.25
FOXN1O15353 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC22.88■■□□□ 1.25
FOXN1O15353 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
FOXN1O15353 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
FOXN1O15353 TEX30-205ENST00000376029 959 ntTSL 2 BASIC22.88■■□□□ 1.25
FOXN1O15353 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC22.88■■□□□ 1.25
FOXN1O15353 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
FOXN1O15353 AC106795.1-205ENST00000512851 1056 ntBASIC22.88■■□□□ 1.25
FOXN1O15353 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC22.88■■□□□ 1.25
FOXN1O15353 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC22.88■■□□□ 1.25
FOXN1O15353 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
FOXN1O15353 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
FOXN1O15353 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
FOXN1O15353 AC096733.2-201ENST00000609937 1394 ntBASIC22.88■■□□□ 1.25
FOXN1O15353 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC22.88■■□□□ 1.25
FOXN1O15353 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC22.87■■□□□ 1.25
FOXN1O15353 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
FOXN1O15353 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC22.87■■□□□ 1.25
FOXN1O15353 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
FOXN1O15353 MIR1233-2-201ENST00000408138 82 ntBASIC22.87■■□□□ 1.25
FOXN1O15353 MIR1233-1-201ENST00000408722 82 ntBASIC22.87■■□□□ 1.25
FOXN1O15353 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC22.87■■□□□ 1.25
FOXN1O15353 AL023803.3-201ENST00000615559 522 ntBASIC22.87■■□□□ 1.25
FOXN1O15353 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
FOXN1O15353 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
FOXN1O15353 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
FOXN1O15353 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
FOXN1O15353 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC22.86■■□□□ 1.25
FOXN1O15353 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC22.86■■□□□ 1.25
FOXN1O15353 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
FOXN1O15353 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC22.86■■□□□ 1.25
FOXN1O15353 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
FOXN1O15353 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC22.86■■□□□ 1.25
FOXN1O15353 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC22.86■■□□□ 1.25
FOXN1O15353 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC22.86■■□□□ 1.25
FOXN1O15353 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC22.86■■□□□ 1.25
FOXN1O15353 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC22.86■■□□□ 1.25
FOXN1O15353 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
FOXN1O15353 AC011298.2-201ENST00000617989 482 ntBASIC22.86■■□□□ 1.25
FOXN1O15353 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
FOXN1O15353 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
FOXN1O15353 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
FOXN1O15353 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC22.86■■□□□ 1.25
FOXN1O15353 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC22.85■■□□□ 1.25
FOXN1O15353 BID-204ENST00000399767 2129 ntTSL 2 BASIC22.85■■□□□ 1.25
FOXN1O15353 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
FOXN1O15353 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC22.85■■□□□ 1.25
FOXN1O15353 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC22.85■■□□□ 1.25
FOXN1O15353 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
FOXN1O15353 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
FOXN1O15353 PMS2P1-201ENST00000431037 1228 ntBASIC22.85■■□□□ 1.25
FOXN1O15353 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC22.85■■□□□ 1.25
FOXN1O15353 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC22.85■■□□□ 1.25
FOXN1O15353 MIR3180-1-201ENST00000580374 94 ntBASIC22.85■■□□□ 1.25
FOXN1O15353 MIR3180-3-201ENST00000584616 94 ntBASIC22.85■■□□□ 1.25
FOXN1O15353 AL732292.2-201ENST00000609649 430 ntBASIC22.85■■□□□ 1.25
FOXN1O15353 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC22.85■■□□□ 1.25
FOXN1O15353 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC22.85■■□□□ 1.25
FOXN1O15353 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22.85■■□□□ 1.25
FOXN1O15353 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
FOXN1O15353 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
FOXN1O15353 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
FOXN1O15353 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
FOXN1O15353 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
FOXN1O15353 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
FOXN1O15353 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC22.84■■□□□ 1.25
FOXN1O15353 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
FOXN1O15353 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
FOXN1O15353 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
FOXN1O15353 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC22.84■■□□□ 1.25
FOXN1O15353 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
FOXN1O15353 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC22.84■■□□□ 1.25
FOXN1O15353 AP002469.2-201ENST00000531724 424 ntBASIC22.84■■□□□ 1.25
FOXN1O15353 RCC2P6-201ENST00000526625 1557 ntBASIC22.84■■□□□ 1.25
FOXN1O15353 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
FOXN1O15353 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
FOXN1O15353 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
FOXN1O15353 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC22.83■■□□□ 1.25
FOXN1O15353 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
FOXN1O15353 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
FOXN1O15353 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
FOXN1O15353 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
FOXN1O15353 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
FOXN1O15353 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC22.83■■□□□ 1.25
FOXN1O15353 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC22.83■■□□□ 1.25
FOXN1O15353 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC22.83■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms