Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SPTLC1O15269 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SPTLC1O15269 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.52■□□□□ 0.87
SPTLC1O15269 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SPTLC1O15269 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.51■□□□□ 0.87
SPTLC1O15269 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.51■□□□□ 0.87
SPTLC1O15269 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPTLC1O15269 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPTLC1O15269 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.51■□□□□ 0.87
SPTLC1O15269 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPTLC1O15269 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.51■□□□□ 0.87
SPTLC1O15269 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPTLC1O15269 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPTLC1O15269 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPTLC1O15269 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.51■□□□□ 0.87
SPTLC1O15269 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPTLC1O15269 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPTLC1O15269 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPTLC1O15269 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.51■□□□□ 0.87
SPTLC1O15269 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.51■□□□□ 0.87
SPTLC1O15269 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.51■□□□□ 0.87
SPTLC1O15269 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPTLC1O15269 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
SPTLC1O15269 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.51■□□□□ 0.87
SPTLC1O15269 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SPTLC1O15269 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPTLC1O15269 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPTLC1O15269 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.51■□□□□ 0.87
SPTLC1O15269 AC073508.3-201ENST00000619697 1419 ntBASIC20.51■□□□□ 0.87
SPTLC1O15269 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPTLC1O15269 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPTLC1O15269 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPTLC1O15269 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.5■□□□□ 0.87
SPTLC1O15269 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SPTLC1O15269 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPTLC1O15269 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPTLC1O15269 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPTLC1O15269 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SPTLC1O15269 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SPTLC1O15269 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.5■□□□□ 0.87
SPTLC1O15269 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPTLC1O15269 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPTLC1O15269 AC113347.1-201ENST00000413321 391 ntBASIC20.5■□□□□ 0.87
SPTLC1O15269 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.5■□□□□ 0.87
SPTLC1O15269 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPTLC1O15269 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.5■□□□□ 0.87
SPTLC1O15269 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.5■□□□□ 0.87
SPTLC1O15269 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SPTLC1O15269 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.5■□□□□ 0.87
SPTLC1O15269 AC010203.1-204ENST00000548782 407 ntBASIC20.5■□□□□ 0.87
SPTLC1O15269 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPTLC1O15269 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.5■□□□□ 0.87
SPTLC1O15269 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SPTLC1O15269 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPTLC1O15269 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPTLC1O15269 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SPTLC1O15269 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SPTLC1O15269 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SPTLC1O15269 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.49■□□□□ 0.87
SPTLC1O15269 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.49■□□□□ 0.87
SPTLC1O15269 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.49■□□□□ 0.87
SPTLC1O15269 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.49■□□□□ 0.87
SPTLC1O15269 TERF1P1-201ENST00000311003 1181 ntBASIC20.49■□□□□ 0.87
SPTLC1O15269 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.49■□□□□ 0.87
SPTLC1O15269 SLC25A1P2-201ENST00000430693 912 ntBASIC20.49■□□□□ 0.87
SPTLC1O15269 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.49■□□□□ 0.87
SPTLC1O15269 PRSS44-201ENST00000515154 1146 ntBASIC20.49■□□□□ 0.87
SPTLC1O15269 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.49■□□□□ 0.87
SPTLC1O15269 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SPTLC1O15269 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SPTLC1O15269 AC092338.2-201ENST00000568827 1415 ntBASIC20.49■□□□□ 0.87
SPTLC1O15269 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SPTLC1O15269 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
SPTLC1O15269 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.49■□□□□ 0.87
SPTLC1O15269 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.49■□□□□ 0.87
SPTLC1O15269 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SPTLC1O15269 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPTLC1O15269 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.48■□□□□ 0.87
SPTLC1O15269 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.48■□□□□ 0.87
SPTLC1O15269 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SPTLC1O15269 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SPTLC1O15269 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPTLC1O15269 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPTLC1O15269 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPTLC1O15269 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPTLC1O15269 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SPTLC1O15269 AC007663.1-201ENST00000438948 1240 ntBASIC20.48■□□□□ 0.87
SPTLC1O15269 KRT18P57-201ENST00000443599 1254 ntBASIC20.48■□□□□ 0.87
SPTLC1O15269 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.48■□□□□ 0.87
SPTLC1O15269 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SPTLC1O15269 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPTLC1O15269 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPTLC1O15269 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.48■□□□□ 0.87
SPTLC1O15269 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SPTLC1O15269 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPTLC1O15269 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.48■□□□□ 0.87
SPTLC1O15269 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
SPTLC1O15269 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPTLC1O15269 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SPTLC1O15269 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms