Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RTL8CO15255 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
RTL8CO15255 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RTL8CO15255 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
RTL8CO15255 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC12.76□□□□□ -0.37
RTL8CO15255 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC12.76□□□□□ -0.37
RTL8CO15255 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
RTL8CO15255 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC12.76□□□□□ -0.37
RTL8CO15255 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC12.76□□□□□ -0.37
RTL8CO15255 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC12.76□□□□□ -0.37
RTL8CO15255 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RTL8CO15255 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC12.76□□□□□ -0.37
RTL8CO15255 FDX1P1-201ENST00000449115 551 ntBASIC12.76□□□□□ -0.37
RTL8CO15255 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC12.76□□□□□ -0.37
RTL8CO15255 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.76□□□□□ -0.37
RTL8CO15255 SKP2-204ENST00000508514 821 ntTSL 3 BASIC12.76□□□□□ -0.37
RTL8CO15255 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC12.76□□□□□ -0.37
RTL8CO15255 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.76□□□□□ -0.37
RTL8CO15255 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC12.76□□□□□ -0.37
RTL8CO15255 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RTL8CO15255 PRELID1P1-202ENST00000567272 903 ntBASIC12.76□□□□□ -0.37
RTL8CO15255 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RTL8CO15255 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RTL8CO15255 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RTL8CO15255 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RTL8CO15255 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RTL8CO15255 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC12.76□□□□□ -0.37
RTL8CO15255 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RTL8CO15255 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RTL8CO15255 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RTL8CO15255 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RTL8CO15255 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC12.76□□□□□ -0.37
RTL8CO15255 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RTL8CO15255 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RTL8CO15255 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
RTL8CO15255 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RTL8CO15255 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RTL8CO15255 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC12.76□□□□□ -0.37
RTL8CO15255 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RTL8CO15255 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RTL8CO15255 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RTL8CO15255 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RTL8CO15255 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RTL8CO15255 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RTL8CO15255 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RTL8CO15255 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RTL8CO15255 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC12.75□□□□□ -0.37
RTL8CO15255 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RTL8CO15255 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RTL8CO15255 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RTL8CO15255 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RTL8CO15255 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
RTL8CO15255 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RTL8CO15255 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RTL8CO15255 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RTL8CO15255 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC12.75□□□□□ -0.37
RTL8CO15255 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RTL8CO15255 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RTL8CO15255 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RTL8CO15255 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RTL8CO15255 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC12.75□□□□□ -0.37
RTL8CO15255 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
RTL8CO15255 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
RTL8CO15255 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RTL8CO15255 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RTL8CO15255 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RTL8CO15255 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RTL8CO15255 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RTL8CO15255 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RTL8CO15255 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RTL8CO15255 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RTL8CO15255 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
RTL8CO15255 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RTL8CO15255 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RTL8CO15255 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC12.74□□□□□ -0.37
RTL8CO15255 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC12.74□□□□□ -0.37
RTL8CO15255 BX119927.1-201ENST00000636596 1552 ntBASIC12.74□□□□□ -0.37
RTL8CO15255 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RTL8CO15255 KRT8P11-201ENST00000409686 1436 ntBASIC12.74□□□□□ -0.37
RTL8CO15255 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RTL8CO15255 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RTL8CO15255 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
RTL8CO15255 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RTL8CO15255 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RTL8CO15255 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RTL8CO15255 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC12.74□□□□□ -0.37
RTL8CO15255 HBZP1-201ENST00000354915 429 ntBASIC12.74□□□□□ -0.37
RTL8CO15255 AL645929.1-201ENST00000420084 975 ntBASIC12.74□□□□□ -0.37
RTL8CO15255 AL845331.1-201ENST00000424978 1190 ntBASIC12.74□□□□□ -0.37
RTL8CO15255 PVRIG2P-201ENST00000435460 978 ntBASIC12.74□□□□□ -0.37
RTL8CO15255 AP000347.1-202ENST00000435868 847 ntBASIC12.74□□□□□ -0.37
RTL8CO15255 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC12.74□□□□□ -0.37
RTL8CO15255 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC12.74□□□□□ -0.37
RTL8CO15255 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC12.74□□□□□ -0.37
RTL8CO15255 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RTL8CO15255 AC092329.2-201ENST00000598402 547 ntBASIC12.74□□□□□ -0.37
RTL8CO15255 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RTL8CO15255 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RTL8CO15255 AC020907.5-201ENST00000624372 1936 ntBASIC12.74□□□□□ -0.37
RTL8CO15255 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms