Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
CHD1O14646 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
CHD1O14646 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CHD1O14646 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC31.1■■■□□ 2.57
CHD1O14646 AC139887.3-201ENST00000568585 713 ntBASIC31.1■■■□□ 2.57
CHD1O14646 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CHD1O14646 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CHD1O14646 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CHD1O14646 AC092720.2-201ENST00000602388 1665 ntBASIC31.09■■■□□ 2.57
CHD1O14646 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CHD1O14646 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
CHD1O14646 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CHD1O14646 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC31.09■■■□□ 2.57
CHD1O14646 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CHD1O14646 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC31.09■■■□□ 2.57
CHD1O14646 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CHD1O14646 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC31.09■■■□□ 2.57
CHD1O14646 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CHD1O14646 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC31.08■■■□□ 2.57
CHD1O14646 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
CHD1O14646 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
CHD1O14646 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CHD1O14646 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CHD1O14646 AP001160.2-201ENST00000596071 487 ntBASIC31.08■■■□□ 2.57
CHD1O14646 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC31.08■■■□□ 2.57
CHD1O14646 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC31.08■■■□□ 2.57
CHD1O14646 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
CHD1O14646 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CHD1O14646 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
CHD1O14646 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CHD1O14646 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC31.08■■■□□ 2.57
CHD1O14646 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CHD1O14646 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC31.07■■■□□ 2.56
CHD1O14646 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CHD1O14646 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CHD1O14646 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC31.07■■■□□ 2.56
CHD1O14646 AC008608.2-201ENST00000606089 416 ntBASIC31.07■■■□□ 2.56
CHD1O14646 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC31.07■■■□□ 2.56
CHD1O14646 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC31.07■■■□□ 2.56
CHD1O14646 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC31.07■■■□□ 2.56
CHD1O14646 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CHD1O14646 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CHD1O14646 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CHD1O14646 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.56
CHD1O14646 BID-203ENST00000399765 1879 ntTSL 2 BASIC31.07■■■□□ 2.56
CHD1O14646 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CHD1O14646 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CHD1O14646 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CHD1O14646 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC31.07■■■□□ 2.56
CHD1O14646 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CHD1O14646 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
CHD1O14646 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CHD1O14646 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CHD1O14646 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CHD1O14646 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CHD1O14646 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC31.06■■■□□ 2.56
CHD1O14646 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC31.06■■■□□ 2.56
CHD1O14646 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CHD1O14646 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC31.06■■■□□ 2.56
CHD1O14646 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC31.06■■■□□ 2.56
CHD1O14646 AF186996.4-201ENST00000467186 377 ntBASIC31.06■■■□□ 2.56
CHD1O14646 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC31.06■■■□□ 2.56
CHD1O14646 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CHD1O14646 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CHD1O14646 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CHD1O14646 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC31.06■■■□□ 2.56
CHD1O14646 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
CHD1O14646 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
CHD1O14646 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CHD1O14646 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
CHD1O14646 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
CHD1O14646 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CHD1O14646 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC31.05■■■□□ 2.56
CHD1O14646 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC31.05■■■□□ 2.56
CHD1O14646 AC009065.1-201ENST00000564055 1225 ntBASIC31.05■■■□□ 2.56
CHD1O14646 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC31.05■■■□□ 2.56
CHD1O14646 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC31.05■■■□□ 2.56
CHD1O14646 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CHD1O14646 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC31.05■■■□□ 2.56
CHD1O14646 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CHD1O14646 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CHD1O14646 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CHD1O14646 KRT18P23-201ENST00000435622 1283 ntBASIC31.04■■■□□ 2.56
CHD1O14646 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC31.04■■■□□ 2.56
CHD1O14646 RPL13AP23-201ENST00000480739 586 ntBASIC31.04■■■□□ 2.56
CHD1O14646 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CHD1O14646 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC31.04■■■□□ 2.56
CHD1O14646 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CHD1O14646 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CHD1O14646 GALC-202ENST00000393568 2054 ntTSL 2 BASIC31.04■■■□□ 2.56
CHD1O14646 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CHD1O14646 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CHD1O14646 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC31.04■■■□□ 2.56
CHD1O14646 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CHD1O14646 CCNC-219ENST00000627680 896 ntTSL 5 BASIC31.04■■■□□ 2.56
CHD1O14646 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CHD1O14646 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CHD1O14646 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CHD1O14646 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
CHD1O14646 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms