Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
O00370 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
O00370 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.44■□□□□ 0.86
O00370 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
O00370 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
O00370 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
O00370 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.43■□□□□ 0.86
O00370 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
O00370 KRT8P41-201ENST00000533985 1514 ntBASIC20.43■□□□□ 0.86
O00370 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.43■□□□□ 0.86
O00370 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
O00370 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.43■□□□□ 0.86
O00370 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
O00370 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
O00370 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
O00370 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
O00370 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
O00370 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
O00370 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
O00370 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.43■□□□□ 0.86
O00370 AC026271.3-201ENST00000571884 352 ntBASIC20.43■□□□□ 0.86
O00370 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.43■□□□□ 0.86
O00370 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
O00370 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.43■□□□□ 0.86
O00370 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
O00370 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
O00370 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.43■□□□□ 0.86
O00370 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.43■□□□□ 0.86
O00370 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
O00370 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
O00370 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
O00370 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
O00370 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
O00370 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
O00370 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
O00370 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.42■□□□□ 0.86
O00370 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.42■□□□□ 0.86
O00370 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
O00370 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.42■□□□□ 0.86
O00370 AL031985.4-201ENST00000642138 673 ntBASIC20.42■□□□□ 0.86
O00370 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
O00370 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
O00370 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
O00370 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.42■□□□□ 0.86
O00370 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.42■□□□□ 0.86
O00370 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
O00370 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.42■□□□□ 0.86
O00370 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
O00370 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
O00370 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.42■□□□□ 0.86
O00370 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
O00370 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
O00370 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.41■□□□□ 0.86
O00370 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.41■□□□□ 0.86
O00370 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
O00370 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.41■□□□□ 0.86
O00370 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
O00370 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.41■□□□□ 0.86
O00370 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
O00370 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
O00370 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
O00370 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
O00370 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
O00370 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
O00370 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
O00370 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
O00370 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.41■□□□□ 0.86
O00370 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
O00370 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.41■□□□□ 0.86
O00370 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
O00370 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.41■□□□□ 0.86
O00370 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
O00370 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
O00370 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
O00370 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
O00370 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
O00370 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.4■□□□□ 0.86
O00370 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
O00370 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
O00370 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
O00370 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
O00370 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.4■□□□□ 0.86
O00370 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.4■□□□□ 0.86
O00370 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
O00370 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
O00370 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.4■□□□□ 0.86
O00370 AC093827.2-201ENST00000512654 315 ntBASIC20.4■□□□□ 0.86
O00370 RCC2P6-201ENST00000526625 1557 ntBASIC20.4■□□□□ 0.86
O00370 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.4■□□□□ 0.86
O00370 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.4■□□□□ 0.86
O00370 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.4■□□□□ 0.86
O00370 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.4■□□□□ 0.86
O00370 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.4■□□□□ 0.86
O00370 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.4■□□□□ 0.86
O00370 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
O00370 TEX21P-204ENST00000641479 1693 ntBASIC20.4■□□□□ 0.86
O00370 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.4■□□□□ 0.86
O00370 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
O00370 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
O00370 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms