Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TAF4O00268 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.74■□□□□ 0.59
TAF4O00268 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.74■□□□□ 0.59
TAF4O00268 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.74■□□□□ 0.59
TAF4O00268 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.74■□□□□ 0.59
TAF4O00268 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.74■□□□□ 0.59
TAF4O00268 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TAF4O00268 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TAF4O00268 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.74■□□□□ 0.59
TAF4O00268 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TAF4O00268 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TAF4O00268 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.74■□□□□ 0.59
TAF4O00268 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TAF4O00268 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TAF4O00268 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TAF4O00268 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
TAF4O00268 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TAF4O00268 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
TAF4O00268 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TAF4O00268 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TAF4O00268 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TAF4O00268 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.73■□□□□ 0.59
TAF4O00268 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TAF4O00268 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TAF4O00268 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TAF4O00268 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TAF4O00268 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TAF4O00268 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.73■□□□□ 0.59
TAF4O00268 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.73■□□□□ 0.59
TAF4O00268 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.73■□□□□ 0.59
TAF4O00268 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.73■□□□□ 0.59
TAF4O00268 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.73■□□□□ 0.59
TAF4O00268 AC069148.1-201ENST00000608741 768 ntBASIC18.73■□□□□ 0.59
TAF4O00268 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.73■□□□□ 0.59
TAF4O00268 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TAF4O00268 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TAF4O00268 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TAF4O00268 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
TAF4O00268 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TAF4O00268 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TAF4O00268 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.73■□□□□ 0.59
TAF4O00268 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TAF4O00268 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TAF4O00268 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.72■□□□□ 0.59
TAF4O00268 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TAF4O00268 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TAF4O00268 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.72■□□□□ 0.59
TAF4O00268 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TAF4O00268 PCDHAC2-203ENST00000615316 3011 ntBASIC18.72■□□□□ 0.59
TAF4O00268 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.72■□□□□ 0.59
TAF4O00268 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TAF4O00268 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.72■□□□□ 0.59
TAF4O00268 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.72■□□□□ 0.59
TAF4O00268 TSPY21P-201ENST00000433481 731 ntBASIC18.72■□□□□ 0.59
TAF4O00268 TSPY23P-201ENST00000440136 739 ntBASIC18.72■□□□□ 0.59
TAF4O00268 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TAF4O00268 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.72■□□□□ 0.59
TAF4O00268 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.72■□□□□ 0.59
TAF4O00268 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.72■□□□□ 0.59
TAF4O00268 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.72■□□□□ 0.59
TAF4O00268 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.72■□□□□ 0.59
TAF4O00268 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.72■□□□□ 0.59
TAF4O00268 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TAF4O00268 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TAF4O00268 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TAF4O00268 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TAF4O00268 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TAF4O00268 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TAF4O00268 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TAF4O00268 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TAF4O00268 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TAF4O00268 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TAF4O00268 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TAF4O00268 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TAF4O00268 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TAF4O00268 AL671277.2-201ENST00000458060 996 ntBASIC18.71■□□□□ 0.59
TAF4O00268 AC026271.3-201ENST00000571884 352 ntBASIC18.71■□□□□ 0.59
TAF4O00268 AC130371.2-201ENST00000619443 611 ntBASIC18.71■□□□□ 0.59
TAF4O00268 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TAF4O00268 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TAF4O00268 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TAF4O00268 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TAF4O00268 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.58
TAF4O00268 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.7■□□□□ 0.58
TAF4O00268 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TAF4O00268 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TAF4O00268 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TAF4O00268 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TAF4O00268 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
TAF4O00268 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TAF4O00268 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TAF4O00268 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TAF4O00268 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TAF4O00268 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TAF4O00268 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.7■□□□□ 0.58
TAF4O00268 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TAF4O00268 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TAF4O00268 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.7■□□□□ 0.58
TAF4O00268 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.7■□□□□ 0.58
TAF4O00268 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms