Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.46■□□□□ 0.39
NPIPA3F8WFD2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.46■□□□□ 0.39
NPIPA3F8WFD2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPA3F8WFD2 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
NPIPA3F8WFD2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
NPIPA3F8WFD2 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
NPIPA3F8WFD2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 TERF1P1-201ENST00000311003 1181 ntBASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 LIN28AP1-201ENST00000429574 405 ntBASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 FAM207BP-201ENST00000447172 505 ntBASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 AC008040.2-201ENST00000461049 708 ntBASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 ECEL1P2-202ENST00000465689 757 ntBASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.45■□□□□ 0.38
NPIPA3F8WFD2 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.44■□□□□ 0.38
NPIPA3F8WFD2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.44■□□□□ 0.38
NPIPA3F8WFD2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NPIPA3F8WFD2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPA3F8WFD2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NPIPA3F8WFD2 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPA3F8WFD2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.44■□□□□ 0.38
NPIPA3F8WFD2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NPIPA3F8WFD2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPA3F8WFD2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.44■□□□□ 0.38
NPIPA3F8WFD2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPA3F8WFD2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPA3F8WFD2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
NPIPA3F8WFD2 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
NPIPA3F8WFD2 ATP5G1P1-201ENST00000448724 379 ntBASIC17.44■□□□□ 0.38
NPIPA3F8WFD2 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.44■□□□□ 0.38
NPIPA3F8WFD2 EGLN1P1-201ENST00000531623 762 ntBASIC17.44■□□□□ 0.38
NPIPA3F8WFD2 AL445228.2-201ENST00000605589 952 ntBASIC17.44■□□□□ 0.38
NPIPA3F8WFD2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.44■□□□□ 0.38
NPIPA3F8WFD2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.44■□□□□ 0.38
NPIPA3F8WFD2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPA3F8WFD2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
NPIPA3F8WFD2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPA3F8WFD2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPA3F8WFD2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPA3F8WFD2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPA3F8WFD2 AC125437.2-201ENST00000625180 2167 ntBASIC17.43■□□□□ 0.38
NPIPA3F8WFD2 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NPIPA3F8WFD2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
NPIPA3F8WFD2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.43■□□□□ 0.38
NPIPA3F8WFD2 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPA3F8WFD2 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPA3F8WFD2 ARMC10P1-201ENST00000313754 855 ntBASIC17.43■□□□□ 0.38
NPIPA3F8WFD2 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPA3F8WFD2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
NPIPA3F8WFD2 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NPIPA3F8WFD2 AC128688.1-201ENST00000487626 519 ntBASIC17.43■□□□□ 0.38
NPIPA3F8WFD2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.43■□□□□ 0.38
NPIPA3F8WFD2 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.43■□□□□ 0.38
NPIPA3F8WFD2 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
NPIPA3F8WFD2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPA3F8WFD2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPA3F8WFD2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.43■□□□□ 0.38
NPIPA3F8WFD2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPA3F8WFD2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.43■□□□□ 0.38
NPIPA3F8WFD2 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.43■□□□□ 0.38
NPIPA3F8WFD2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.43■□□□□ 0.38
NPIPA3F8WFD2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPA3F8WFD2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPA3F8WFD2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPIPA3F8WFD2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.42■□□□□ 0.38
NPIPA3F8WFD2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.42■□□□□ 0.38
NPIPA3F8WFD2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPIPA3F8WFD2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NPIPA3F8WFD2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.42■□□□□ 0.38
NPIPA3F8WFD2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms