Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.45■□□□□ 0.7
TBC1D3BA6NDS4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.45■□□□□ 0.7
TBC1D3BA6NDS4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.45■□□□□ 0.7
TBC1D3BA6NDS4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.45■□□□□ 0.7
TBC1D3BA6NDS4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.45■□□□□ 0.7
TBC1D3BA6NDS4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.45■□□□□ 0.7
TBC1D3BA6NDS4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.45■□□□□ 0.7
TBC1D3BA6NDS4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.45■□□□□ 0.7
TBC1D3BA6NDS4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TBC1D3BA6NDS4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TBC1D3BA6NDS4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TBC1D3BA6NDS4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TBC1D3BA6NDS4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TBC1D3BA6NDS4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.45■□□□□ 0.7
TBC1D3BA6NDS4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TBC1D3BA6NDS4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
TBC1D3BA6NDS4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TBC1D3BA6NDS4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TBC1D3BA6NDS4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TBC1D3BA6NDS4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
TBC1D3BA6NDS4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TBC1D3BA6NDS4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.44■□□□□ 0.7
TBC1D3BA6NDS4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.44■□□□□ 0.7
TBC1D3BA6NDS4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TBC1D3BA6NDS4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TBC1D3BA6NDS4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.44■□□□□ 0.7
TBC1D3BA6NDS4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.44■□□□□ 0.7
TBC1D3BA6NDS4 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.44■□□□□ 0.7
TBC1D3BA6NDS4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
TBC1D3BA6NDS4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TBC1D3BA6NDS4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TBC1D3BA6NDS4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TBC1D3BA6NDS4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TBC1D3BA6NDS4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.44■□□□□ 0.7
TBC1D3BA6NDS4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TBC1D3BA6NDS4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TBC1D3BA6NDS4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.44■□□□□ 0.7
TBC1D3BA6NDS4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
TBC1D3BA6NDS4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TBC1D3BA6NDS4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TBC1D3BA6NDS4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TBC1D3BA6NDS4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.43■□□□□ 0.7
TBC1D3BA6NDS4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TBC1D3BA6NDS4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TBC1D3BA6NDS4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TBC1D3BA6NDS4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.43■□□□□ 0.7
TBC1D3BA6NDS4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TBC1D3BA6NDS4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TBC1D3BA6NDS4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TBC1D3BA6NDS4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TBC1D3BA6NDS4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TBC1D3BA6NDS4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.43■□□□□ 0.7
TBC1D3BA6NDS4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TBC1D3BA6NDS4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TBC1D3BA6NDS4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TBC1D3BA6NDS4 AC009947.2-201ENST00000444014 672 ntBASIC19.43■□□□□ 0.7
TBC1D3BA6NDS4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.43■□□□□ 0.7
TBC1D3BA6NDS4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.43■□□□□ 0.7
TBC1D3BA6NDS4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.43■□□□□ 0.7
TBC1D3BA6NDS4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TBC1D3BA6NDS4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.43■□□□□ 0.7
TBC1D3BA6NDS4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.43■□□□□ 0.7
TBC1D3BA6NDS4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.43■□□□□ 0.7
TBC1D3BA6NDS4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TBC1D3BA6NDS4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TBC1D3BA6NDS4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.43■□□□□ 0.7
TBC1D3BA6NDS4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.43■□□□□ 0.7
TBC1D3BA6NDS4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TBC1D3BA6NDS4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.43■□□□□ 0.7
TBC1D3BA6NDS4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TBC1D3BA6NDS4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TBC1D3BA6NDS4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
TBC1D3BA6NDS4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TBC1D3BA6NDS4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TBC1D3BA6NDS4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.42■□□□□ 0.7
TBC1D3BA6NDS4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.42■□□□□ 0.7
TBC1D3BA6NDS4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TBC1D3BA6NDS4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TBC1D3BA6NDS4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TBC1D3BA6NDS4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.42■□□□□ 0.7
TBC1D3BA6NDS4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TBC1D3BA6NDS4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TBC1D3BA6NDS4 AL671277.2-201ENST00000458060 996 ntBASIC19.42■□□□□ 0.7
TBC1D3BA6NDS4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.42■□□□□ 0.7
TBC1D3BA6NDS4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.42■□□□□ 0.7
TBC1D3BA6NDS4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.42■□□□□ 0.7
TBC1D3BA6NDS4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.42■□□□□ 0.7
TBC1D3BA6NDS4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TBC1D3BA6NDS4 AL121956.5-201ENST00000625261 221 ntBASIC19.42■□□□□ 0.7
TBC1D3BA6NDS4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TBC1D3BA6NDS4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TBC1D3BA6NDS4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.42■□□□□ 0.7
TBC1D3BA6NDS4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TBC1D3BA6NDS4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TBC1D3BA6NDS4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TBC1D3BA6NDS4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TBC1D3BA6NDS4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
TBC1D3BA6NDS4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TBC1D3BA6NDS4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
TBC1D3BA6NDS4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms