Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC66A2RUB6 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC66A2RUB6 AC022517.1-201ENST00000592429 346 ntBASIC20.7■□□□□ 0.9
CCDC66A2RUB6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CCDC66A2RUB6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC66A2RUB6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CCDC66A2RUB6 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC66A2RUB6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC66A2RUB6 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC66A2RUB6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC66A2RUB6 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC66A2RUB6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC66A2RUB6 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC66A2RUB6 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC66A2RUB6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC66A2RUB6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC66A2RUB6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC66A2RUB6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC66A2RUB6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC66A2RUB6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC66A2RUB6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC66A2RUB6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC66A2RUB6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC66A2RUB6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC66A2RUB6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC66A2RUB6 AL512625.2-201ENST00000417533 625 ntBASIC20.69■□□□□ 0.9
CCDC66A2RUB6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC66A2RUB6 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC66A2RUB6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC66A2RUB6 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC66A2RUB6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.69■□□□□ 0.9
CCDC66A2RUB6 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC66A2RUB6 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC66A2RUB6 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC66A2RUB6 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC66A2RUB6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
CCDC66A2RUB6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC66A2RUB6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC66A2RUB6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC66A2RUB6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CCDC66A2RUB6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC66A2RUB6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC66A2RUB6 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CCDC66A2RUB6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC66A2RUB6 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC66A2RUB6 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC66A2RUB6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC66A2RUB6 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC66A2RUB6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC66A2RUB6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC66A2RUB6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC66A2RUB6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC66A2RUB6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CCDC66A2RUB6 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC66A2RUB6 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC66A2RUB6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC66A2RUB6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC66A2RUB6 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CCDC66A2RUB6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC66A2RUB6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC66A2RUB6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC66A2RUB6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC66A2RUB6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC66A2RUB6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC66A2RUB6 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC66A2RUB6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC66A2RUB6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC66A2RUB6 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms