Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC28.37■■■□□ 2.13
HFM1A2PYH4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC28.37■■■□□ 2.13
HFM1A2PYH4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
HFM1A2PYH4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
HFM1A2PYH4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
HFM1A2PYH4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC28.37■■■□□ 2.13
HFM1A2PYH4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC28.37■■■□□ 2.13
HFM1A2PYH4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
HFM1A2PYH4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
HFM1A2PYH4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
HFM1A2PYH4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC28.37■■■□□ 2.13
HFM1A2PYH4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC28.37■■■□□ 2.13
HFM1A2PYH4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
HFM1A2PYH4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
HFM1A2PYH4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
HFM1A2PYH4 KRT8P45-201ENST00000414328 1447 ntBASIC28.36■■■□□ 2.13
HFM1A2PYH4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
HFM1A2PYH4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
HFM1A2PYH4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
HFM1A2PYH4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC28.36■■■□□ 2.13
HFM1A2PYH4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
HFM1A2PYH4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
HFM1A2PYH4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC28.36■■■□□ 2.13
HFM1A2PYH4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
HFM1A2PYH4 AL032819.2-201ENST00000624543 2162 ntBASIC28.36■■■□□ 2.13
HFM1A2PYH4 GPAT2P1-201ENST00000444924 1672 ntBASIC28.36■■■□□ 2.13
HFM1A2PYH4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
HFM1A2PYH4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
HFM1A2PYH4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC28.36■■■□□ 2.13
HFM1A2PYH4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC28.36■■■□□ 2.13
HFM1A2PYH4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
HFM1A2PYH4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC28.36■■■□□ 2.13
HFM1A2PYH4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
HFM1A2PYH4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC28.35■■■□□ 2.13
HFM1A2PYH4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC28.35■■■□□ 2.13
HFM1A2PYH4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC28.35■■■□□ 2.13
HFM1A2PYH4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC28.35■■■□□ 2.13
HFM1A2PYH4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
HFM1A2PYH4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
HFM1A2PYH4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC28.35■■■□□ 2.13
HFM1A2PYH4 UBQLN4P1-201ENST00000461599 1801 ntBASIC28.35■■■□□ 2.13
HFM1A2PYH4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
HFM1A2PYH4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
HFM1A2PYH4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC28.35■■■□□ 2.13
HFM1A2PYH4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
HFM1A2PYH4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
HFM1A2PYH4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
HFM1A2PYH4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC28.35■■■□□ 2.13
HFM1A2PYH4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
HFM1A2PYH4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC28.35■■■□□ 2.13
HFM1A2PYH4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
HFM1A2PYH4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC28.34■■■□□ 2.13
HFM1A2PYH4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC28.34■■■□□ 2.13
HFM1A2PYH4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC28.34■■■□□ 2.13
HFM1A2PYH4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC28.34■■■□□ 2.13
HFM1A2PYH4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
HFM1A2PYH4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
HFM1A2PYH4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC28.34■■■□□ 2.13
HFM1A2PYH4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
HFM1A2PYH4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
HFM1A2PYH4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC28.34■■■□□ 2.13
HFM1A2PYH4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC28.34■■■□□ 2.13
HFM1A2PYH4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
HFM1A2PYH4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
HFM1A2PYH4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
HFM1A2PYH4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
HFM1A2PYH4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC28.33■■■□□ 2.13
HFM1A2PYH4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
HFM1A2PYH4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
HFM1A2PYH4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
HFM1A2PYH4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC28.33■■■□□ 2.13
HFM1A2PYH4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
HFM1A2PYH4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
HFM1A2PYH4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
HFM1A2PYH4 AC117947.1-201ENST00000427448 529 ntBASIC28.33■■■□□ 2.13
HFM1A2PYH4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
HFM1A2PYH4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC28.33■■■□□ 2.13
HFM1A2PYH4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC28.33■■■□□ 2.13
HFM1A2PYH4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC28.33■■■□□ 2.13
HFM1A2PYH4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
HFM1A2PYH4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC28.33■■■□□ 2.13
HFM1A2PYH4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
HFM1A2PYH4 FEM1AP3-201ENST00000403722 1741 ntBASIC28.32■■■□□ 2.12
HFM1A2PYH4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC28.32■■■□□ 2.12
HFM1A2PYH4 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC28.32■■■□□ 2.12
HFM1A2PYH4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
HFM1A2PYH4 FP475955.4-201ENST00000623131 1990 ntBASIC28.32■■■□□ 2.12
HFM1A2PYH4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
HFM1A2PYH4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC28.32■■■□□ 2.12
HFM1A2PYH4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
HFM1A2PYH4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC28.32■■■□□ 2.12
HFM1A2PYH4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC28.32■■■□□ 2.12
HFM1A2PYH4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
HFM1A2PYH4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
HFM1A2PYH4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
HFM1A2PYH4 AC141257.4-201ENST00000634557 245 ntBASIC28.32■■■□□ 2.12
HFM1A2PYH4 AC136944.6-201ENST00000634818 245 ntBASIC28.32■■■□□ 2.12
HFM1A2PYH4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
HFM1A2PYH4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
HFM1A2PYH4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms