Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC78A2IDD5 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC78A2IDD5 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.39■□□□□ 0.7
CCDC78A2IDD5 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.39■□□□□ 0.7
CCDC78A2IDD5 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC78A2IDD5 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCDC78A2IDD5 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC78A2IDD5 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC78A2IDD5 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC78A2IDD5 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC78A2IDD5 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC78A2IDD5 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC78A2IDD5 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC78A2IDD5 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC78A2IDD5 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC78A2IDD5 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC78A2IDD5 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC78A2IDD5 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CCDC78A2IDD5 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC78A2IDD5 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC78A2IDD5 AC141586.3-201ENST00000562166 1838 ntBASIC19.39■□□□□ 0.69
CCDC78A2IDD5 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC78A2IDD5 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
CCDC78A2IDD5 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CCDC78A2IDD5 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC78A2IDD5 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC78A2IDD5 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC78A2IDD5 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC78A2IDD5 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC78A2IDD5 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC78A2IDD5 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC78A2IDD5 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC78A2IDD5 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CCDC78A2IDD5 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.38■□□□□ 0.69
CCDC78A2IDD5 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.38■□□□□ 0.69
CCDC78A2IDD5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC78A2IDD5 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC78A2IDD5 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC78A2IDD5 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC78A2IDD5 C1QBPP2-201ENST00000528754 825 ntBASIC19.38■□□□□ 0.69
CCDC78A2IDD5 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.38■□□□□ 0.69
CCDC78A2IDD5 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC78A2IDD5 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CCDC78A2IDD5 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC78A2IDD5 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC78A2IDD5 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.38■□□□□ 0.69
CCDC78A2IDD5 AC124016.1-201ENST00000609552 612 ntBASIC19.38■□□□□ 0.69
CCDC78A2IDD5 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CCDC78A2IDD5 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC78A2IDD5 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.38■□□□□ 0.69
CCDC78A2IDD5 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC78A2IDD5 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC78A2IDD5 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC78A2IDD5 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC78A2IDD5 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC78A2IDD5 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC78A2IDD5 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC78A2IDD5 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC78A2IDD5 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC78A2IDD5 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC78A2IDD5 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
CCDC78A2IDD5 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC78A2IDD5 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC78A2IDD5 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC78A2IDD5 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC78A2IDD5 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC78A2IDD5 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC78A2IDD5 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC78A2IDD5 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CCDC78A2IDD5 RN7SL471P-201ENST00000580476 299 ntBASIC19.37■□□□□ 0.69
CCDC78A2IDD5 AC004264.1-201ENST00000608354 794 ntBASIC19.37■□□□□ 0.69
CCDC78A2IDD5 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC78A2IDD5 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC78A2IDD5 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC78A2IDD5 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC78A2IDD5 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC78A2IDD5 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC78A2IDD5 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCDC78A2IDD5 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCDC78A2IDD5 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC78A2IDD5 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC78A2IDD5 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC78A2IDD5 BX323043.1-201ENST00000641006 1765 ntBASIC19.37■□□□□ 0.69
CCDC78A2IDD5 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC78A2IDD5 AC093503.3-201ENST00000624917 2352 ntBASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms