Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TMEM129A0AVI4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TMEM129A0AVI4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM129A0AVI4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM129A0AVI4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM129A0AVI4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TMEM129A0AVI4 AC005332.8-201ENST00000622750 2735 ntBASIC17.32■□□□□ 0.36
TMEM129A0AVI4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.32■□□□□ 0.36
TMEM129A0AVI4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.32■□□□□ 0.36
TMEM129A0AVI4 PRORSD1P-201ENST00000295112 541 ntBASIC17.32■□□□□ 0.36
TMEM129A0AVI4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM129A0AVI4 KRT18P29-201ENST00000397031 1267 ntBASIC17.32■□□□□ 0.36
TMEM129A0AVI4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TMEM129A0AVI4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
TMEM129A0AVI4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM129A0AVI4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.32■□□□□ 0.36
TMEM129A0AVI4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.32■□□□□ 0.36
TMEM129A0AVI4 UNC93B4-201ENST00000505679 747 ntBASIC17.32■□□□□ 0.36
TMEM129A0AVI4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM129A0AVI4 AC023632.3-201ENST00000521633 145 ntBASIC17.32■□□□□ 0.36
TMEM129A0AVI4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEM129A0AVI4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.32■□□□□ 0.36
TMEM129A0AVI4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TMEM129A0AVI4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TMEM129A0AVI4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TMEM129A0AVI4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM129A0AVI4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEM129A0AVI4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM129A0AVI4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM129A0AVI4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM129A0AVI4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM129A0AVI4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM129A0AVI4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM129A0AVI4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM129A0AVI4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM129A0AVI4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM129A0AVI4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM129A0AVI4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM129A0AVI4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TMEM129A0AVI4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TMEM129A0AVI4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.31■□□□□ 0.36
TMEM129A0AVI4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM129A0AVI4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM129A0AVI4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM129A0AVI4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM129A0AVI4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TMEM129A0AVI4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM129A0AVI4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM129A0AVI4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TMEM129A0AVI4 AC008687.6-201ENST00000596318 630 ntBASIC17.31■□□□□ 0.36
TMEM129A0AVI4 AC006058.3-201ENST00000606217 1069 ntBASIC17.31■□□□□ 0.36
TMEM129A0AVI4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM129A0AVI4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.31■□□□□ 0.36
TMEM129A0AVI4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.31■□□□□ 0.36
TMEM129A0AVI4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM129A0AVI4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM129A0AVI4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TMEM129A0AVI4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM129A0AVI4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM129A0AVI4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM129A0AVI4 AL354751.1-201ENST00000412768 1863 ntBASIC17.31■□□□□ 0.36
TMEM129A0AVI4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM129A0AVI4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.3■□□□□ 0.36
TMEM129A0AVI4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 AC128676.1-201ENST00000454392 318 ntBASIC17.3■□□□□ 0.36
TMEM129A0AVI4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM129A0AVI4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms