Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC13.52□□□□□ -0.24
TRBV6-4A0A1B0GX49 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TRBV6-4A0A1B0GX49 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
TRBV6-4A0A1B0GX49 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRBV6-4A0A1B0GX49 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRBV6-4A0A1B0GX49 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC13.52□□□□□ -0.24
TRBV6-4A0A1B0GX49 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
TRBV6-4A0A1B0GX49 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRBV6-4A0A1B0GX49 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TRBV6-4A0A1B0GX49 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRBV6-4A0A1B0GX49 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.24
TRBV6-4A0A1B0GX49 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-4A0A1B0GX49 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-4A0A1B0GX49 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC13.52□□□□□ -0.25
TRBV6-4A0A1B0GX49 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-4A0A1B0GX49 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-4A0A1B0GX49 KRASP1-201ENST00000407852 552 ntBASIC13.52□□□□□ -0.25
TRBV6-4A0A1B0GX49 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-4A0A1B0GX49 AC133681.1-201ENST00000465482 601 ntBASIC13.52□□□□□ -0.25
TRBV6-4A0A1B0GX49 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC13.52□□□□□ -0.25
TRBV6-4A0A1B0GX49 LY6E-205ENST00000519611 635 ntTSL 3 BASIC13.52□□□□□ -0.25
TRBV6-4A0A1B0GX49 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
TRBV6-4A0A1B0GX49 ADM-205ENST00000528544 586 ntTSL 2 BASIC13.52□□□□□ -0.25
TRBV6-4A0A1B0GX49 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC13.52□□□□□ -0.25
TRBV6-4A0A1B0GX49 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
TRBV6-4A0A1B0GX49 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC13.52□□□□□ -0.25
TRBV6-4A0A1B0GX49 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
TRBV6-4A0A1B0GX49 HLA-A-209ENST00000638375 975 ntBASIC13.52□□□□□ -0.25
TRBV6-4A0A1B0GX49 AL023875.1-201ENST00000640777 796 ntBASIC13.52□□□□□ -0.25
TRBV6-4A0A1B0GX49 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC13.52□□□□□ -0.25
TRBV6-4A0A1B0GX49 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC13.52□□□□□ -0.25
TRBV6-4A0A1B0GX49 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-4A0A1B0GX49 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
TRBV6-4A0A1B0GX49 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
TRBV6-4A0A1B0GX49 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-4A0A1B0GX49 UBQLN4P1-201ENST00000461599 1801 ntBASIC13.52□□□□□ -0.25
TRBV6-4A0A1B0GX49 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-4A0A1B0GX49 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-4A0A1B0GX49 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-4A0A1B0GX49 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
TRBV6-4A0A1B0GX49 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-4A0A1B0GX49 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-4A0A1B0GX49 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
TRBV6-4A0A1B0GX49 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 RN7SL471P-201ENST00000580476 299 ntBASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 AC110285.5-201ENST00000611501 352 ntBASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-4A0A1B0GX49 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms