Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.45■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.45■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.45■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.45■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.45■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.45■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.45■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.45■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 AL355355.2-201ENST00000442321 338 ntBASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 Z85996.1-201ENST00000494644 937 ntBASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 AL031985.4-201ENST00000642138 673 ntBASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.43■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.43■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 AC211429.1-201ENST00000415277 523 ntBASIC17.43■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 ECEL1P3-201ENST00000427961 737 ntBASIC17.43■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 AC026271.3-201ENST00000571884 352 ntBASIC17.43■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.43■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.43■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.43■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.43■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 AC141586.3-201ENST00000562166 1838 ntBASIC17.42■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.42■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.42■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 TEX21P-204ENST00000641479 1693 ntBASIC17.42■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 KRT8P41-201ENST00000533985 1514 ntBASIC17.42■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.42■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.42■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.41■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.41■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.41■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.41■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.41■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFSF12-TNFSF13A0A0A6YY99 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms