Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.81□□□□□ -1.8
UPF2Q9HAU5 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.81□□□□□ -1.8
UPF2Q9HAU5 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.81□□□□□ -1.8
UPF2Q9HAU5 MIR4504-201ENST00000577413 92 ntBASIC3.81□□□□□ -1.8
UPF2Q9HAU5 AP000811.1-201ENST00000603803 651 ntBASIC3.81□□□□□ -1.8
UPF2Q9HAU5 AC105129.3-201ENST00000605455 485 ntBASIC3.81□□□□□ -1.8
UPF2Q9HAU5 AL109618.2-201ENST00000605527 211 ntBASIC3.81□□□□□ -1.8
UPF2Q9HAU5 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.81□□□□□ -1.8
UPF2Q9HAU5 U3.45-201ENST00000607547 219 ntBASIC3.81□□□□□ -1.8
UPF2Q9HAU5 AP001521.1-201ENST00000609150 300 ntBASIC3.81□□□□□ -1.8
UPF2Q9HAU5 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
UPF2Q9HAU5 AF246928.1-201ENST00000623768 87 ntBASIC3.81□□□□□ -1.8
UPF2Q9HAU5 AC244258.1-201ENST00000637553 1071 ntBASIC3.81□□□□□ -1.8
UPF2Q9HAU5 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
UPF2Q9HAU5 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
UPF2Q9HAU5 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.81□□□□□ -1.8
UPF2Q9HAU5 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.8□□□□□ -1.8
UPF2Q9HAU5 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
UPF2Q9HAU5 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
UPF2Q9HAU5 Y_RNA.51-201ENST00000362725 102 ntBASIC3.8□□□□□ -1.8
UPF2Q9HAU5 RNU6-216P-201ENST00000363282 104 ntBASIC3.8□□□□□ -1.8
UPF2Q9HAU5 SNORA4.1-201ENST00000364263 144 ntBASIC3.8□□□□□ -1.8
UPF2Q9HAU5 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
UPF2Q9HAU5 TAF9BP1-201ENST00000396646 746 ntBASIC3.8□□□□□ -1.8
UPF2Q9HAU5 AC025750.1-201ENST00000399891 379 ntBASIC3.8□□□□□ -1.8
UPF2Q9HAU5 CYCSP45-201ENST00000402289 315 ntBASIC3.8□□□□□ -1.8
UPF2Q9HAU5 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
UPF2Q9HAU5 RNU6ATAC-201ENST00000408749 126 ntBASIC3.8□□□□□ -1.8
UPF2Q9HAU5 RN7SKP202-201ENST00000410439 330 ntBASIC3.8□□□□□ -1.8
UPF2Q9HAU5 RNU2-37P-201ENST00000410695 177 ntBASIC3.8□□□□□ -1.8
UPF2Q9HAU5 HMGN1P24-201ENST00000412282 298 ntBASIC3.8□□□□□ -1.8
UPF2Q9HAU5 BTF3L4P1-201ENST00000413813 468 ntBASIC3.8□□□□□ -1.8
UPF2Q9HAU5 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.8□□□□□ -1.8
UPF2Q9HAU5 MTCO3P1-205ENST00000422088 832 ntBASIC3.8□□□□□ -1.8
UPF2Q9HAU5 AC007389.2-201ENST00000434630 306 ntBASIC3.8□□□□□ -1.8
UPF2Q9HAU5 HSPD1P21-201ENST00000436541 245 ntBASIC3.8□□□□□ -1.8
UPF2Q9HAU5 AC108734.1-201ENST00000439549 399 ntBASIC3.8□□□□□ -1.8
UPF2Q9HAU5 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.8□□□□□ -1.8
UPF2Q9HAU5 RPL26P28-201ENST00000451325 435 ntBASIC3.8□□□□□ -1.8
UPF2Q9HAU5 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.8□□□□□ -1.8
UPF2Q9HAU5 RPL18AP17-201ENST00000455326 198 ntBASIC3.8□□□□□ -1.8
UPF2Q9HAU5 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.8□□□□□ -1.8
UPF2Q9HAU5 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.8□□□□□ -1.8
UPF2Q9HAU5 RPL7P15-201ENST00000461190 712 ntBASIC3.8□□□□□ -1.8
UPF2Q9HAU5 RN7SL633P-201ENST00000488974 297 ntBASIC3.8□□□□□ -1.8
UPF2Q9HAU5 MTCO1P30-201ENST00000515244 580 ntBASIC3.8□□□□□ -1.8
UPF2Q9HAU5 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.8□□□□□ -1.8
UPF2Q9HAU5 SLC2A13P1-201ENST00000531560 322 ntBASIC3.8□□□□□ -1.8
UPF2Q9HAU5 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.8□□□□□ -1.8
UPF2Q9HAU5 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.8□□□□□ -1.8
UPF2Q9HAU5 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.8□□□□□ -1.8
UPF2Q9HAU5 ZNF192P1-203ENST00000565888 810 ntBASIC3.8□□□□□ -1.8
UPF2Q9HAU5 MIR5186-201ENST00000577504 120 ntBASIC3.8□□□□□ -1.8
UPF2Q9HAU5 MIR2682-201ENST00000580305 110 ntBASIC3.8□□□□□ -1.8
UPF2Q9HAU5 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.8□□□□□ -1.8
UPF2Q9HAU5 SNORD39.3-201ENST00000584451 71 ntBASIC3.8□□□□□ -1.8
UPF2Q9HAU5 AC024560.3-201ENST00000608482 349 ntBASIC3.8□□□□□ -1.8
UPF2Q9HAU5 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
UPF2Q9HAU5 AC098679.5-201ENST00000624394 571 ntBASIC3.8□□□□□ -1.8
UPF2Q9HAU5 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.8□□□□□ -1.8
UPF2Q9HAU5 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
UPF2Q9HAU5 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.8□□□□□ -1.8
UPF2Q9HAU5 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
UPF2Q9HAU5 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
UPF2Q9HAU5 AL390862.1-201ENST00000635467 1469 ntBASIC3.79□□□□□ -1.8
UPF2Q9HAU5 DBF4P1-201ENST00000412976 1892 ntBASIC3.79□□□□□ -1.8
UPF2Q9HAU5 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
UPF2Q9HAU5 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.79□□□□□ -1.8
UPF2Q9HAU5 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.79□□□□□ -1.8
UPF2Q9HAU5 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
UPF2Q9HAU5 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
UPF2Q9HAU5 Y_RNA.436-201ENST00000384097 102 ntBASIC3.79□□□□□ -1.8
UPF2Q9HAU5 Y_RNA.560-201ENST00000384689 102 ntBASIC3.79□□□□□ -1.8
UPF2Q9HAU5 AL031577.2-201ENST00000404133 280 ntBASIC3.79□□□□□ -1.8
UPF2Q9HAU5 NPM1P11-201ENST00000417106 855 ntBASIC3.79□□□□□ -1.8
UPF2Q9HAU5 MTND1P20-201ENST00000430341 950 ntBASIC3.79□□□□□ -1.8
UPF2Q9HAU5 RPL36P19-201ENST00000430744 301 ntBASIC3.79□□□□□ -1.8
UPF2Q9HAU5 AL353705.1-201ENST00000433468 480 ntBASIC3.79□□□□□ -1.8
UPF2Q9HAU5 AC241584.1-201ENST00000438469 1241 ntBASIC3.79□□□□□ -1.8
UPF2Q9HAU5 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.79□□□□□ -1.8
UPF2Q9HAU5 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.79□□□□□ -1.8
UPF2Q9HAU5 NDUFA5P7-201ENST00000452914 242 ntBASIC3.79□□□□□ -1.8
UPF2Q9HAU5 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.79□□□□□ -1.8
UPF2Q9HAU5 AP004217.1-201ENST00000480579 346 ntBASIC3.79□□□□□ -1.8
UPF2Q9HAU5 AC108860.1-201ENST00000484521 383 ntBASIC3.79□□□□□ -1.8
UPF2Q9HAU5 RPL7P23-201ENST00000493874 747 ntBASIC3.79□□□□□ -1.8
UPF2Q9HAU5 MTCYBP17-201ENST00000503579 789 ntBASIC3.79□□□□□ -1.8
UPF2Q9HAU5 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.79□□□□□ -1.8
UPF2Q9HAU5 AC021678.1-201ENST00000505195 936 ntBASIC3.79□□□□□ -1.8
UPF2Q9HAU5 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.79□□□□□ -1.8
UPF2Q9HAU5 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.79□□□□□ -1.8
UPF2Q9HAU5 RNU4-60P-201ENST00000517239 135 ntBASIC3.79□□□□□ -1.8
UPF2Q9HAU5 PAICSP4-201ENST00000517543 1253 ntBASIC3.79□□□□□ -1.8
UPF2Q9HAU5 SOD1P3-201ENST00000518682 454 ntBASIC3.79□□□□□ -1.8
UPF2Q9HAU5 OR5AK1P-201ENST00000524837 922 ntBASIC3.79□□□□□ -1.8
UPF2Q9HAU5 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.79□□□□□ -1.8
UPF2Q9HAU5 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.79□□□□□ -1.8
UPF2Q9HAU5 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
UPF2Q9HAU5 AC007115.1-201ENST00000546853 234 ntBASIC3.79□□□□□ -1.8
UPF2Q9HAU5 MTCYBP33-201ENST00000575007 1130 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms