Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 Z95327.1-201ENST00000446082 482 ntBASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 AC090255.1-201ENST00000495779 349 ntBASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 COL6A4P2-205ENST00000509855 506 ntBASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 RNU6-1095P-201ENST00000516148 108 ntBASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 RNU1-95P-201ENST00000516357 160 ntBASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 RNU1-128P-201ENST00000516704 160 ntBASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 IGJP1-201ENST00000522682 475 ntBASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 AC124293.1-201ENST00000530034 493 ntBASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 SNORD53-201ENST00000579969 78 ntBASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 AC060766.3-201ENST00000591442 263 ntBASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 AL121772.2-201ENST00000614331 297 ntBASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.16□□□□□ -1.9
PKNOX2Q96KN3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
PKNOX2Q96KN3 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.15□□□□□ -1.91
PKNOX2Q96KN3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.15□□□□□ -1.91
PKNOX2Q96KN3 AL009174.1-201ENST00000426577 416 ntBASIC3.15□□□□□ -1.91
PKNOX2Q96KN3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.15□□□□□ -1.91
PKNOX2Q96KN3 AC092641.1-201ENST00000440229 772 ntBASIC3.15□□□□□ -1.91
PKNOX2Q96KN3 AC005002.1-201ENST00000447458 540 ntBASIC3.15□□□□□ -1.91
PKNOX2Q96KN3 WASF1P1-201ENST00000447560 1131 ntBASIC3.15□□□□□ -1.91
PKNOX2Q96KN3 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PKNOX2Q96KN3 GTF2IP12-201ENST00000456547 356 ntBASIC3.15□□□□□ -1.91
PKNOX2Q96KN3 SETP6-201ENST00000479329 568 ntBASIC3.15□□□□□ -1.91
PKNOX2Q96KN3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PKNOX2Q96KN3 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.15□□□□□ -1.91
PKNOX2Q96KN3 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.15□□□□□ -1.91
PKNOX2Q96KN3 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PKNOX2Q96KN3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.15□□□□□ -1.91
PKNOX2Q96KN3 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.15□□□□□ -1.91
PKNOX2Q96KN3 AC090888.1-201ENST00000561335 1141 ntBASIC3.15□□□□□ -1.91
PKNOX2Q96KN3 AC025281.1-201ENST00000567026 265 ntBASIC3.15□□□□□ -1.91
PKNOX2Q96KN3 AC023824.3-201ENST00000569003 562 ntBASIC3.15□□□□□ -1.91
PKNOX2Q96KN3 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.15□□□□□ -1.91
PKNOX2Q96KN3 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.15□□□□□ -1.91
PKNOX2Q96KN3 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.15□□□□□ -1.91
PKNOX2Q96KN3 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.15□□□□□ -1.91
PKNOX2Q96KN3 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.15□□□□□ -1.91
PKNOX2Q96KN3 AC016542.1-201ENST00000608259 493 ntBASIC3.15□□□□□ -1.91
PKNOX2Q96KN3 KPNA2P1-201ENST00000458289 1591 ntBASIC3.15□□□□□ -1.91
PKNOX2Q96KN3 AC024341.1-201ENST00000526444 1552 ntBASIC3.15□□□□□ -1.91
PKNOX2Q96KN3 AC012321.1-201ENST00000561622 1588 ntBASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 U3.37-201ENST00000408528 213 ntBASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 U3.40-201ENST00000408706 208 ntBASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 USP9YP27-201ENST00000418455 438 ntBASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 MTND4LP10-201ENST00000435146 291 ntBASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 UBE2FP3-201ENST00000436366 524 ntBASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 MRPL50P4-201ENST00000446432 475 ntBASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 AL162389.1-201ENST00000449233 177 ntBASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 NUTF2P7-201ENST00000453086 375 ntBASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 MTCYBP17-201ENST00000503579 789 ntBASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 AC021678.1-201ENST00000505195 936 ntBASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 AL359273.1-201ENST00000510918 627 ntBASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 RNU6-416P-201ENST00000516265 103 ntBASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 CASP1P1-201ENST00000526345 212 ntBASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 AL138976.2-201ENST00000563989 694 ntBASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 MIR2682-201ENST00000580305 110 ntBASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 RN7SL339P-201ENST00000580597 296 ntBASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 MIR4276-201ENST00000584832 70 ntBASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 CCDC58P3-201ENST00000590792 430 ntBASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 AC119501.1-201ENST00000603646 475 ntBASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 AP000254.1-201ENST00000609934 520 ntBASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 MIR8084-201ENST00000614105 89 ntBASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 AC107308.1-201ENST00000615897 301 ntBASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 AC007336.1-201ENST00000576365 3828 ntBASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
PKNOX2Q96KN3 MTND4P35-201ENST00000604257 1375 ntBASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 DEFB108F-201ENST00000344638 222 ntBASIC3.13□□□□□ -1.91
PKNOX2Q96KN3 RNU6-609P-201ENST00000365459 107 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms