Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 MIR135A2-201ENST00000384854 100 ntBASIC4.63□□□□□ -1.67
SHISA3A0PJX4 RNU6-817P-201ENST00000391083 104 ntBASIC4.63□□□□□ -1.67
SHISA3A0PJX4 Y_RNA.645-201ENST00000391229 102 ntBASIC4.63□□□□□ -1.67
SHISA3A0PJX4 OR6E1P-201ENST00000414424 923 ntBASIC4.63□□□□□ -1.67
SHISA3A0PJX4 AC080125.1-201ENST00000414888 684 ntBASIC4.63□□□□□ -1.67
SHISA3A0PJX4 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.63□□□□□ -1.67
SHISA3A0PJX4 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.63□□□□□ -1.67
SHISA3A0PJX4 USP9YP16-201ENST00000430287 407 ntBASIC4.63□□□□□ -1.67
SHISA3A0PJX4 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.63□□□□□ -1.67
SHISA3A0PJX4 AC099799.1-201ENST00000439809 192 ntBASIC4.63□□□□□ -1.67
SHISA3A0PJX4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.63□□□□□ -1.67
SHISA3A0PJX4 AL121871.1-201ENST00000443413 436 ntBASIC4.63□□□□□ -1.67
SHISA3A0PJX4 CYCSP51-201ENST00000443545 318 ntBASIC4.63□□□□□ -1.67
SHISA3A0PJX4 MRPL48P1-201ENST00000445390 636 ntBASIC4.63□□□□□ -1.67
SHISA3A0PJX4 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.63□□□□□ -1.67
SHISA3A0PJX4 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.63□□□□□ -1.67
SHISA3A0PJX4 USP9YP23-201ENST00000455085 407 ntBASIC4.63□□□□□ -1.67
SHISA3A0PJX4 HMGB3P30-201ENST00000457863 606 ntBASIC4.63□□□□□ -1.67
SHISA3A0PJX4 RNU6-953P-201ENST00000459154 107 ntBASIC4.63□□□□□ -1.67
SHISA3A0PJX4 RPL37P6-202ENST00000464216 403 ntBASIC4.63□□□□□ -1.67
SHISA3A0PJX4 AC087884.1-201ENST00000469738 328 ntBASIC4.63□□□□□ -1.67
SHISA3A0PJX4 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC4.63□□□□□ -1.67
SHISA3A0PJX4 VN1R105P-201ENST00000486595 910 ntBASIC4.63□□□□□ -1.67
SHISA3A0PJX4 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.63□□□□□ -1.67
SHISA3A0PJX4 RNU6-1095P-201ENST00000516148 108 ntBASIC4.63□□□□□ -1.67
SHISA3A0PJX4 RN7SKP234-201ENST00000517173 224 ntBASIC4.63□□□□□ -1.67
SHISA3A0PJX4 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.63□□□□□ -1.67
SHISA3A0PJX4 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SHISA3A0PJX4 AP004607.2-201ENST00000533949 322 ntBASIC4.63□□□□□ -1.67
SHISA3A0PJX4 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHISA3A0PJX4 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.63□□□□□ -1.67
SHISA3A0PJX4 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.63□□□□□ -1.67
SHISA3A0PJX4 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC4.63□□□□□ -1.67
SHISA3A0PJX4 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHISA3A0PJX4 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHISA3A0PJX4 IGHV3-29-201ENST00000604817 344 ntBASIC4.63□□□□□ -1.67
SHISA3A0PJX4 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SHISA3A0PJX4 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.63□□□□□ -1.67
SHISA3A0PJX4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHISA3A0PJX4 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHISA3A0PJX4 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHISA3A0PJX4 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.63□□□□□ -1.67
SHISA3A0PJX4 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SHISA3A0PJX4 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.63□□□□□ -1.67
SHISA3A0PJX4 AC023421.1-201ENST00000590535 1785 ntBASIC4.63□□□□□ -1.67
SHISA3A0PJX4 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SHISA3A0PJX4 AC063976.2-201ENST00000425667 3556 ntBASIC4.63□□□□□ -1.67
SHISA3A0PJX4 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHISA3A0PJX4 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHISA3A0PJX4 AL731566.1-201ENST00000620490 1937 ntBASIC4.62□□□□□ -1.67
SHISA3A0PJX4 AC104118.1-201ENST00000607625 1589 ntBASIC4.62□□□□□ -1.67
SHISA3A0PJX4 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.62□□□□□ -1.67
SHISA3A0PJX4 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.62□□□□□ -1.67
SHISA3A0PJX4 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SHISA3A0PJX4 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SHISA3A0PJX4 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SHISA3A0PJX4 SMG1P6-201ENST00000532337 2930 ntBASIC4.62□□□□□ -1.67
SHISA3A0PJX4 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.62□□□□□ -1.67
SHISA3A0PJX4 Y_RNA.389-201ENST00000383924 113 ntBASIC4.62□□□□□ -1.67
SHISA3A0PJX4 Y_RNA.473-201ENST00000384333 102 ntBASIC4.62□□□□□ -1.67
SHISA3A0PJX4 Y_RNA.480-201ENST00000384364 102 ntBASIC4.62□□□□□ -1.67
SHISA3A0PJX4 AC005522.1-201ENST00000395416 346 ntBASIC4.62□□□□□ -1.67
SHISA3A0PJX4 AL139039.1-201ENST00000401900 692 ntBASIC4.62□□□□□ -1.67
SHISA3A0PJX4 MIR1203-201ENST00000408812 85 ntBASIC4.62□□□□□ -1.67
SHISA3A0PJX4 AC007738.1-201ENST00000413892 348 ntBASIC4.62□□□□□ -1.67
SHISA3A0PJX4 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.62□□□□□ -1.67
SHISA3A0PJX4 UBE2V1P4-201ENST00000425374 344 ntBASIC4.62□□□□□ -1.67
SHISA3A0PJX4 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.62□□□□□ -1.67
SHISA3A0PJX4 AC004866.2-201ENST00000438285 481 ntBASIC4.62□□□□□ -1.67
SHISA3A0PJX4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.62□□□□□ -1.67
SHISA3A0PJX4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.62□□□□□ -1.67
SHISA3A0PJX4 AP000281.1-201ENST00000444036 316 ntBASIC4.62□□□□□ -1.67
SHISA3A0PJX4 AC144530.1-201ENST00000452862 555 ntBASIC4.62□□□□□ -1.67
SHISA3A0PJX4 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.62□□□□□ -1.67
SHISA3A0PJX4 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.62□□□□□ -1.67
SHISA3A0PJX4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.62□□□□□ -1.67
SHISA3A0PJX4 SNORD116-26-201ENST00000516006 96 ntBASIC4.62□□□□□ -1.67
SHISA3A0PJX4 SCARNA16.2-201ENST00000516520 172 ntBASIC4.62□□□□□ -1.67
SHISA3A0PJX4 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.62□□□□□ -1.67
SHISA3A0PJX4 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.62□□□□□ -1.67
SHISA3A0PJX4 AP000648.1-201ENST00000529682 397 ntBASIC4.62□□□□□ -1.67
SHISA3A0PJX4 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.62□□□□□ -1.67
SHISA3A0PJX4 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.62□□□□□ -1.67
SHISA3A0PJX4 RN7SL435P-201ENST00000584418 282 ntBASIC4.62□□□□□ -1.67
SHISA3A0PJX4 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.62□□□□□ -1.67
SHISA3A0PJX4 AL162431.4-201ENST00000604674 411 ntBASIC4.62□□□□□ -1.67
SHISA3A0PJX4 AC007619.2-201ENST00000605743 379 ntBASIC4.62□□□□□ -1.67
SHISA3A0PJX4 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.62□□□□□ -1.67
SHISA3A0PJX4 AL096712.1-201ENST00000614561 159 ntBASIC4.62□□□□□ -1.67
SHISA3A0PJX4 RN7SL544P-201ENST00000617232 284 ntBASIC4.62□□□□□ -1.67
SHISA3A0PJX4 RN7SL763P-201ENST00000620922 284 ntBASIC4.62□□□□□ -1.67
SHISA3A0PJX4 AP001005.3-201ENST00000622049 129 ntBASIC4.62□□□□□ -1.67
SHISA3A0PJX4 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.62□□□□□ -1.67
SHISA3A0PJX4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.62□□□□□ -1.67
SHISA3A0PJX4 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.62□□□□□ -1.67
SHISA3A0PJX4 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC4.62□□□□□ -1.67
SHISA3A0PJX4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
SHISA3A0PJX4 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHISA3A0PJX4 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.62□□□□□ -1.67
SHISA3A0PJX4 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms