Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 MTCO2P4-201ENST00000517968 247 ntBASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 AC090616.5-202ENST00000582111 297 ntBASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 HMGN1P30-201ENST00000589286 268 ntBASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 CKS1BP3-201ENST00000600888 237 ntBASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 AL022154.1-201ENST00000604698 785 ntBASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 AL451044.1-201ENST00000604867 238 ntBASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 AL365503.1-201ENST00000605247 905 ntBASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 AC104260.1-201ENST00000616660 539 ntBASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 AC009159.1-201ENST00000618386 642 ntBASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 AP005264.7-201ENST00000625003 745 ntBASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 PISRT1-201ENST00000626175 531 ntBASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 MTND1P37-201ENST00000636562 264 ntBASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 AC010149.2-201ENST00000637608 315 ntBASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
CCDC187A0A096LP49 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 RNU6-989P-201ENST00000362756 107 ntBASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 RN7SKP226-201ENST00000364912 300 ntBASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 U3.20-201ENST00000390909 217 ntBASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 PTMAP2-201ENST00000397627 327 ntBASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 CIR1P3-201ENST00000405137 479 ntBASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 RNU6ATAC-201ENST00000408749 126 ntBASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 AC078974.1-201ENST00000411597 223 ntBASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 AC006946.1-201ENST00000429106 328 ntBASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 AC007389.2-201ENST00000434630 306 ntBASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 UBE2V1P13-201ENST00000436983 439 ntBASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 RPL23AP46-201ENST00000438548 490 ntBASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 AC133473.1-201ENST00000455173 299 ntBASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 MTND1P3-201ENST00000484956 952 ntBASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 Y_RNA.672-201ENST00000516289 104 ntBASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 AC022616.6-201ENST00000520479 119 ntBASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 AC124947.2-202ENST00000552735 133 ntBASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 AL352979.3-201ENST00000553515 247 ntBASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 AC107954.1-201ENST00000565906 727 ntBASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 NRBF2P1-201ENST00000587407 859 ntBASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 AL161729.4-201ENST00000604650 476 ntBASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 Y_RNA.804-201ENST00000615262 101 ntBASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 AC063943.3-201ENST00000615562 356 ntBASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 AC007546.1-201ENST00000619452 559 ntBASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 AC079597.1-201ENST00000624306 508 ntBASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 AC110994.2-201ENST00000635481 492 ntBASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 MIR3688-2-201ENST00000636963 87 ntBASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CCDC187A0A096LP49 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.06□□□□□ -1.76
CCDC187A0A096LP49 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CCDC187A0A096LP49 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC187A0A096LP49 AC027287.1-201ENST00000553115 1453 ntBASIC4.06□□□□□ -1.76
CCDC187A0A096LP49 MTND5P33-201ENST00000571250 1450 ntBASIC4.06□□□□□ -1.76
CCDC187A0A096LP49 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.06□□□□□ -1.76
CCDC187A0A096LP49 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CCDC187A0A096LP49 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC187A0A096LP49 RNA5SP307-201ENST00000362863 116 ntBASIC4.06□□□□□ -1.76
CCDC187A0A096LP49 U8.3-201ENST00000363321 132 ntBASIC4.06□□□□□ -1.76
CCDC187A0A096LP49 RNY4P34-201ENST00000364779 95 ntBASIC4.06□□□□□ -1.76
CCDC187A0A096LP49 RNU6-116P-201ENST00000384042 109 ntBASIC4.06□□□□□ -1.76
CCDC187A0A096LP49 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CCDC187A0A096LP49 MIR921-201ENST00000401133 56 ntBASIC4.06□□□□□ -1.76
CCDC187A0A096LP49 SNORA74C-2-201ENST00000411179 201 ntBASIC4.06□□□□□ -1.76
CCDC187A0A096LP49 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC187A0A096LP49 AC006548.1-201ENST00000427470 102 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms