Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AC103988.1-201ENST00000566382 2177 ntBASIC2.68□□□□□ -1.98
FOXC2Q99958 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
FOXC2Q99958 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.68□□□□□ -1.98
FOXC2Q99958 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.68□□□□□ -1.98
FOXC2Q99958 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
FOXC2Q99958 AC017071.1-201ENST00000564407 2204 ntBASIC2.68□□□□□ -1.98
FOXC2Q99958 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
FOXC2Q99958 CUL1P1-201ENST00000509510 2425 ntBASIC2.68□□□□□ -1.98
FOXC2Q99958 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
FOXC2Q99958 OR1S2-201ENST00000302592 978 ntBASIC2.68□□□□□ -1.98
FOXC2Q99958 RNU6-492P-201ENST00000363035 104 ntBASIC2.68□□□□□ -1.98
FOXC2Q99958 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.68□□□□□ -1.98
FOXC2Q99958 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
FOXC2Q99958 AL136372.1-201ENST00000403060 228 ntBASIC2.68□□□□□ -1.98
FOXC2Q99958 RNU6-55P-201ENST00000411092 107 ntBASIC2.68□□□□□ -1.98
FOXC2Q99958 RNU6-954P-201ENST00000411355 107 ntBASIC2.68□□□□□ -1.98
FOXC2Q99958 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.68□□□□□ -1.98
FOXC2Q99958 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.68□□□□□ -1.98
FOXC2Q99958 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.68□□□□□ -1.98
FOXC2Q99958 RPL7P30-201ENST00000420888 709 ntBASIC2.68□□□□□ -1.98
FOXC2Q99958 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.68□□□□□ -1.98
FOXC2Q99958 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.68□□□□□ -1.98
FOXC2Q99958 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.68□□□□□ -1.98
FOXC2Q99958 AC093156.1-201ENST00000440382 670 ntBASIC2.68□□□□□ -1.98
FOXC2Q99958 OR6K5P-201ENST00000447050 945 ntBASIC2.68□□□□□ -1.98
FOXC2Q99958 RNA5SP310-201ENST00000459084 116 ntBASIC2.68□□□□□ -1.98
FOXC2Q99958 UBL5P3-201ENST00000475112 231 ntBASIC2.68□□□□□ -1.98
FOXC2Q99958 YWHAEP4-201ENST00000505390 198 ntBASIC2.68□□□□□ -1.98
FOXC2Q99958 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.68□□□□□ -1.98
FOXC2Q99958 SNORA48.10-201ENST00000516965 160 ntBASIC2.68□□□□□ -1.98
FOXC2Q99958 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.68□□□□□ -1.98
FOXC2Q99958 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.68□□□□□ -1.98
FOXC2Q99958 AP001804.3-201ENST00000525146 880 ntBASIC2.68□□□□□ -1.98
FOXC2Q99958 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.68□□□□□ -1.98
FOXC2Q99958 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.68□□□□□ -1.98
FOXC2Q99958 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.68□□□□□ -1.98
FOXC2Q99958 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.68□□□□□ -1.98
FOXC2Q99958 MED28P6-201ENST00000558776 231 ntBASIC2.68□□□□□ -1.98
FOXC2Q99958 AC023825.1-201ENST00000566704 1030 ntBASIC2.68□□□□□ -1.98
FOXC2Q99958 AC090330.1-201ENST00000588646 764 ntBASIC2.68□□□□□ -1.98
FOXC2Q99958 AP000238.1-201ENST00000608759 426 ntBASIC2.68□□□□□ -1.98
FOXC2Q99958 TUG1_1.1-201ENST00000610654 145 ntBASIC2.68□□□□□ -1.98
FOXC2Q99958 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
FOXC2Q99958 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
FOXC2Q99958 AC068647.1-201ENST00000489539 2265 ntBASIC2.68□□□□□ -1.98
FOXC2Q99958 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.68□□□□□ -1.98
FOXC2Q99958 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
FOXC2Q99958 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
FOXC2Q99958 AL513185.3-201ENST00000433335 1300 ntBASIC2.68□□□□□ -1.98
FOXC2Q99958 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
FOXC2Q99958 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
FOXC2Q99958 SNORA14A-201ENST00000364773 135 ntBASIC2.67□□□□□ -1.98
FOXC2Q99958 AP002088.1-201ENST00000382740 395 ntBASIC2.67□□□□□ -1.98
FOXC2Q99958 SNORA54-201ENST00000384281 123 ntBASIC2.67□□□□□ -1.98
FOXC2Q99958 SAR1AP2-201ENST00000392696 594 ntBASIC2.67□□□□□ -1.98
FOXC2Q99958 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.67□□□□□ -1.98
FOXC2Q99958 MTCO3P1-205ENST00000422088 832 ntBASIC2.67□□□□□ -1.98
FOXC2Q99958 RPL7P46-201ENST00000425129 740 ntBASIC2.67□□□□□ -1.98
FOXC2Q99958 ZYG11AP1-201ENST00000430329 837 ntBASIC2.67□□□□□ -1.98
FOXC2Q99958 AL139132.1-201ENST00000431587 344 ntBASIC2.67□□□□□ -1.98
FOXC2Q99958 BX679664.1-201ENST00000434429 253 ntBASIC2.67□□□□□ -1.98
FOXC2Q99958 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.67□□□□□ -1.98
FOXC2Q99958 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.67□□□□□ -1.98
FOXC2Q99958 AC010401.1-201ENST00000463867 348 ntBASIC2.67□□□□□ -1.98
FOXC2Q99958 AC013828.1-201ENST00000481845 158 ntBASIC2.67□□□□□ -1.98
FOXC2Q99958 FCF1P3-201ENST00000496394 590 ntBASIC2.67□□□□□ -1.98
FOXC2Q99958 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.67□□□□□ -1.98
FOXC2Q99958 CBX3P3-201ENST00000508108 532 ntBASIC2.67□□□□□ -1.98
FOXC2Q99958 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.67□□□□□ -1.98
FOXC2Q99958 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.67□□□□□ -1.98
FOXC2Q99958 AC023632.1-201ENST00000518463 375 ntBASIC2.67□□□□□ -1.98
FOXC2Q99958 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.67□□□□□ -1.98
FOXC2Q99958 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.67□□□□□ -1.98
FOXC2Q99958 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.67□□□□□ -1.98
FOXC2Q99958 AC068339.2-201ENST00000534395 618 ntBASIC2.67□□□□□ -1.98
FOXC2Q99958 AC008127.2-201ENST00000549925 1075 ntBASIC2.67□□□□□ -1.98
FOXC2Q99958 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.67□□□□□ -1.98
FOXC2Q99958 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.67□□□□□ -1.98
FOXC2Q99958 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.67□□□□□ -1.98
FOXC2Q99958 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.67□□□□□ -1.98
FOXC2Q99958 MIR4319-201ENST00000577285 85 ntBASIC2.67□□□□□ -1.98
FOXC2Q99958 MIR2682-201ENST00000580305 110 ntBASIC2.67□□□□□ -1.98
FOXC2Q99958 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
FOXC2Q99958 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.67□□□□□ -1.98
FOXC2Q99958 AC092953.2-201ENST00000608000 699 ntBASIC2.67□□□□□ -1.98
FOXC2Q99958 AL450489.1-201ENST00000612071 468 ntBASIC2.67□□□□□ -1.98
FOXC2Q99958 AC018926.1-201ENST00000616335 435 ntBASIC2.67□□□□□ -1.98
FOXC2Q99958 MIR6076-201ENST00000617521 113 ntBASIC2.67□□□□□ -1.98
FOXC2Q99958 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.67□□□□□ -1.98
FOXC2Q99958 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.67□□□□□ -1.98
FOXC2Q99958 AL513302.2-201ENST00000562313 1842 ntBASIC2.67□□□□□ -1.98
FOXC2Q99958 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
FOXC2Q99958 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
FOXC2Q99958 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.67□□□□□ -1.98
FOXC2Q99958 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
FOXC2Q99958 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.67□□□□□ -1.98
FOXC2Q99958 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.67□□□□□ -1.98
FOXC2Q99958 HMGB1P5-201ENST00000255320 642 ntBASIC2.66□□□□□ -1.98
FOXC2Q99958 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
FOXC2Q99958 RNU6-878P-201ENST00000384578 110 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms