Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC104985.2-201ENST00000620598 500 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 AC012150.2-201ENST00000621300 544 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 AL158801.5-201ENST00000623123 465 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 AP006248.2-201ENST00000623309 592 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 AC022140.2-201ENST00000623500 188 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 AC009033.1-201ENST00000624279 431 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 AC091925.2-201ENST00000625059 256 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.04□□□□□ -1.76
SNX18Q96RF0 PABPC1P7-201ENST00000413177 1513 ntBASIC4.04□□□□□ -1.76
SNX18Q96RF0 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.04□□□□□ -1.76
SNX18Q96RF0 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.04□□□□□ -1.76
SNX18Q96RF0 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.04□□□□□ -1.76
SNX18Q96RF0 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SNX18Q96RF0 NXPH1-205ENST00000602349 1953 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SNX18Q96RF0 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SNX18Q96RF0 AC139769.1-204ENST00000472297 1931 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 AC138915.3-201ENST00000562908 1389 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SNX18Q96RF0 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SNX18Q96RF0 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.03□□□□□ -1.76
SNX18Q96RF0 RNU6-797P-201ENST00000363101 109 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 RNU4-1-201ENST00000363925 141 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 RNU6-359P-201ENST00000365466 108 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 Y_RNA.381-201ENST00000365666 102 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 RNU6-877P-201ENST00000383868 107 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 RNU6-456P-201ENST00000384493 107 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 RNU1-89P-201ENST00000384592 164 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SNX18Q96RF0 MIR1250-201ENST00000408098 113 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.03□□□□□ -1.76
SNX18Q96RF0 AC092832.1-201ENST00000422934 400 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.03□□□□□ -1.76
SNX18Q96RF0 AC006548.1-201ENST00000427470 102 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.03□□□□□ -1.76
SNX18Q96RF0 EZH2P1-201ENST00000431167 291 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 AC119618.1-201ENST00000434191 222 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.03□□□□□ -1.76
SNX18Q96RF0 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.03□□□□□ -1.76
SNX18Q96RF0 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.03□□□□□ -1.76
SNX18Q96RF0 Z95327.1-201ENST00000446082 482 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 ARL2BPP10-201ENST00000446487 531 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 RPL23AP20-201ENST00000447965 421 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 AL136380.1-201ENST00000447970 162 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.03□□□□□ -1.76
SNX18Q96RF0 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.03□□□□□ -1.76
SNX18Q96RF0 AL353691.1-201ENST00000451332 387 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 RPL23AP41-201ENST00000484754 458 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
SNX18Q96RF0 AC079382.1-201ENST00000493346 557 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.03□□□□□ -1.76
SNX18Q96RF0 AC008628.2-201ENST00000502605 298 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.03□□□□□ -1.76
SNX18Q96RF0 RNU6-1281P-201ENST00000516223 105 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.03□□□□□ -1.76
SNX18Q96RF0 DEFB109D-201ENST00000529497 240 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 AP003034.1-201ENST00000534621 422 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.03□□□□□ -1.76
SNX18Q96RF0 AL512310.1-201ENST00000548639 172 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.03□□□□□ -1.76
SNX18Q96RF0 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.03□□□□□ -1.76
SNX18Q96RF0 AC068790.3-201ENST00000602988 553 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 AC073091.2-201ENST00000603205 907 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 AL355812.1-201ENST00000603215 216 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 Y_RNA.804-201ENST00000615262 101 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.03□□□□□ -1.76
SNX18Q96RF0 AC040168.1-201ENST00000623594 991 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 CR381572.1-201ENST00000625098 102 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SNX18Q96RF0 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.03□□□□□ -1.76
SNX18Q96RF0 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SNX18Q96RF0 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
SNX18Q96RF0 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.03□□□□□ -1.76
SNX18Q96RF0 ZNF33CP-201ENST00000432492 2030 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 AL133412.1-201ENST00000380194 2992 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SNX18Q96RF0 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SNX18Q96RF0 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SNX18Q96RF0 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SNX18Q96RF0 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
SNX18Q96RF0 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SNX18Q96RF0 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SNX18Q96RF0 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SNX18Q96RF0 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.03□□□□□ -1.76
SNX18Q96RF0 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SNX18Q96RF0 MFSD8-216ENST00000641147 4009 ntBASIC4.03□□□□□ -1.76
SNX18Q96RF0 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SNX18Q96RF0 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.02□□□□□ -1.77
SNX18Q96RF0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SNX18Q96RF0 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SNX18Q96RF0 AC011460.1-201ENST00000636268 1834 ntBASIC4.02□□□□□ -1.77
SNX18Q96RF0 AC008725.1-201ENST00000605123 2263 ntBASIC4.02□□□□□ -1.77
SNX18Q96RF0 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SNX18Q96RF0 AC021146.4-201ENST00000309229 279 ntBASIC4.02□□□□□ -1.77
SNX18Q96RF0 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SNX18Q96RF0 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SNX18Q96RF0 RPL32P3-201ENST00000359025 275 ntBASIC4.02□□□□□ -1.77
SNX18Q96RF0 RNU6-1279P-201ENST00000383917 103 ntBASIC4.02□□□□□ -1.77
SNX18Q96RF0 Y_RNA.493-201ENST00000384422 102 ntBASIC4.02□□□□□ -1.77
SNX18Q96RF0 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms