Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC013442.1-201ENST00000397347 228 ntBASIC5.92□□□□□ -1.46
RNF135Q8IUD6 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.92□□□□□ -1.46
RNF135Q8IUD6 RNU2-23P-201ENST00000410545 195 ntBASIC5.92□□□□□ -1.46
RNF135Q8IUD6 AL590399.2-201ENST00000427536 309 ntBASIC5.92□□□□□ -1.46
RNF135Q8IUD6 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.92□□□□□ -1.46
RNF135Q8IUD6 MTND5P15-201ENST00000434246 349 ntBASIC5.92□□□□□ -1.46
RNF135Q8IUD6 RHOT1P3-201ENST00000436571 331 ntBASIC5.92□□□□□ -1.46
RNF135Q8IUD6 NEFMP1-201ENST00000443423 1006 ntBASIC5.92□□□□□ -1.46
RNF135Q8IUD6 OR1H1P-201ENST00000448731 937 ntBASIC5.92□□□□□ -1.46
RNF135Q8IUD6 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC5.92□□□□□ -1.46
RNF135Q8IUD6 AC004129.2-201ENST00000457229 287 ntBASIC5.92□□□□□ -1.46
RNF135Q8IUD6 AC083982.1-201ENST00000485679 344 ntBASIC5.92□□□□□ -1.46
RNF135Q8IUD6 VN1R105P-201ENST00000486595 910 ntBASIC5.92□□□□□ -1.46
RNF135Q8IUD6 HIGD1AP3-201ENST00000515857 278 ntBASIC5.92□□□□□ -1.46
RNF135Q8IUD6 RNU6-390P-201ENST00000516259 103 ntBASIC5.92□□□□□ -1.46
RNF135Q8IUD6 RNU4-77P-201ENST00000516692 156 ntBASIC5.92□□□□□ -1.46
RNF135Q8IUD6 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.92□□□□□ -1.46
RNF135Q8IUD6 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC5.92□□□□□ -1.46
RNF135Q8IUD6 MIR3128-201ENST00000581957 66 ntBASIC5.92□□□□□ -1.46
RNF135Q8IUD6 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.92□□□□□ -1.46
RNF135Q8IUD6 AL360012.1-201ENST00000602813 131 ntBASIC5.92□□□□□ -1.46
RNF135Q8IUD6 AL713866.2-201ENST00000603579 219 ntBASIC5.92□□□□□ -1.46
RNF135Q8IUD6 AL355297.3-201ENST00000604082 446 ntBASIC5.92□□□□□ -1.46
RNF135Q8IUD6 AC104763.2-201ENST00000604179 382 ntBASIC5.92□□□□□ -1.46
RNF135Q8IUD6 IGHV3-29-201ENST00000604817 344 ntBASIC5.92□□□□□ -1.46
RNF135Q8IUD6 PABPC1P7-201ENST00000413177 1513 ntBASIC5.92□□□□□ -1.46
RNF135Q8IUD6 EIF2AP4-201ENST00000424793 1781 ntBASIC5.92□□□□□ -1.46
RNF135Q8IUD6 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
RNF135Q8IUD6 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RNF135Q8IUD6 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
RNF135Q8IUD6 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RNF135Q8IUD6 BTBD10P1-201ENST00000549824 1352 ntBASIC5.92□□□□□ -1.46
RNF135Q8IUD6 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RNF135Q8IUD6 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RNF135Q8IUD6 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.92□□□□□ -1.46
RNF135Q8IUD6 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.91□□□□□ -1.46
RNF135Q8IUD6 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
RNF135Q8IUD6 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RNF135Q8IUD6 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RNF135Q8IUD6 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.91□□□□□ -1.46
RNF135Q8IUD6 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RNF135Q8IUD6 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RNF135Q8IUD6 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RNF135Q8IUD6 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RNF135Q8IUD6 Y_RNA.39-201ENST00000362620 98 ntBASIC5.91□□□□□ -1.46
RNF135Q8IUD6 Y_RNA.60-201ENST00000362831 98 ntBASIC5.91□□□□□ -1.46
RNF135Q8IUD6 RHOT1P2-201ENST00000366423 333 ntBASIC5.91□□□□□ -1.46
RNF135Q8IUD6 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RNF135Q8IUD6 Y_RNA.485-201ENST00000384395 102 ntBASIC5.91□□□□□ -1.46
RNF135Q8IUD6 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
RNF135Q8IUD6 RNU6-55P-201ENST00000411092 107 ntBASIC5.91□□□□□ -1.46
RNF135Q8IUD6 AC092809.3-201ENST00000415453 231 ntBASIC5.91□□□□□ -1.46
RNF135Q8IUD6 AC099677.1-201ENST00000420575 175 ntBASIC5.91□□□□□ -1.46
RNF135Q8IUD6 PGBD4P6-201ENST00000421501 610 ntBASIC5.91□□□□□ -1.46
RNF135Q8IUD6 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.91□□□□□ -1.46
RNF135Q8IUD6 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC5.91□□□□□ -1.46
RNF135Q8IUD6 AC097713.2-201ENST00000430199 356 ntBASIC5.91□□□□□ -1.46
RNF135Q8IUD6 RPS20P1-201ENST00000434853 354 ntBASIC5.91□□□□□ -1.46
RNF135Q8IUD6 AC099799.1-201ENST00000439809 192 ntBASIC5.91□□□□□ -1.46
RNF135Q8IUD6 AC009963.2-201ENST00000453431 138 ntBASIC5.91□□□□□ -1.46
RNF135Q8IUD6 AC084198.1-201ENST00000477747 402 ntBASIC5.91□□□□□ -1.46
RNF135Q8IUD6 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RNF135Q8IUD6 RN7SL346P-201ENST00000491561 294 ntBASIC5.91□□□□□ -1.46
RNF135Q8IUD6 SNRPCP2-201ENST00000504370 475 ntBASIC5.91□□□□□ -1.46
RNF135Q8IUD6 AC009901.1-201ENST00000506703 541 ntBASIC5.91□□□□□ -1.46
RNF135Q8IUD6 RNU6-677P-201ENST00000516914 101 ntBASIC5.91□□□□□ -1.46
RNF135Q8IUD6 AC012400.1-201ENST00000518452 381 ntBASIC5.91□□□□□ -1.46
RNF135Q8IUD6 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.91□□□□□ -1.46
RNF135Q8IUD6 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.91□□□□□ -1.46
RNF135Q8IUD6 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.91□□□□□ -1.46
RNF135Q8IUD6 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
RNF135Q8IUD6 MIR3910-1-201ENST00000580936 111 ntBASIC5.91□□□□□ -1.46
RNF135Q8IUD6 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.91□□□□□ -1.46
RNF135Q8IUD6 AC005224.3-201ENST00000584683 2140 ntBASIC5.91□□□□□ -1.46
RNF135Q8IUD6 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.91□□□□□ -1.46
RNF135Q8IUD6 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.91□□□□□ -1.46
RNF135Q8IUD6 AC007619.2-201ENST00000605743 379 ntBASIC5.91□□□□□ -1.46
RNF135Q8IUD6 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RNF135Q8IUD6 AC015967.1-201ENST00000619893 476 ntBASIC5.91□□□□□ -1.46
RNF135Q8IUD6 AL606534.2-204ENST00000635008 178 ntBASIC5.91□□□□□ -1.46
RNF135Q8IUD6 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RNF135Q8IUD6 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RNF135Q8IUD6 MFSD8-239ENST00000641590 2479 ntBASIC5.91□□□□□ -1.46
RNF135Q8IUD6 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
RNF135Q8IUD6 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
RNF135Q8IUD6 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
RNF135Q8IUD6 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
RNF135Q8IUD6 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
RNF135Q8IUD6 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RNF135Q8IUD6 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
RNF135Q8IUD6 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
RNF135Q8IUD6 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RNF135Q8IUD6 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RNF135Q8IUD6 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
RNF135Q8IUD6 RNU6-1059P-201ENST00000363752 98 ntBASIC5.9□□□□□ -1.46
RNF135Q8IUD6 RNU6-263P-201ENST00000363811 107 ntBASIC5.9□□□□□ -1.46
RNF135Q8IUD6 Y_RNA.380-201ENST00000365663 111 ntBASIC5.9□□□□□ -1.46
RNF135Q8IUD6 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.9□□□□□ -1.46
RNF135Q8IUD6 AC110754.1-201ENST00000399740 601 ntBASIC5.9□□□□□ -1.46
RNF135Q8IUD6 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms