Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 RPL36AP33-201ENST00000450395 310 ntBASIC3.86□□□□□ -1.79
USP41Q3LFD5 RBMY2UP-201ENST00000453474 324 ntBASIC3.86□□□□□ -1.79
USP41Q3LFD5 MTCO3P20-201ENST00000454926 688 ntBASIC3.86□□□□□ -1.79
USP41Q3LFD5 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.86□□□□□ -1.79
USP41Q3LFD5 AP001992.1-205ENST00000462248 379 ntBASIC3.86□□□□□ -1.79
USP41Q3LFD5 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.86□□□□□ -1.79
USP41Q3LFD5 RPS4XP10-201ENST00000465034 731 ntBASIC3.86□□□□□ -1.79
USP41Q3LFD5 SETP11-201ENST00000473027 690 ntBASIC3.86□□□□□ -1.79
USP41Q3LFD5 NIPA2P2-201ENST00000496376 1083 ntBASIC3.86□□□□□ -1.79
USP41Q3LFD5 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.86□□□□□ -1.79
USP41Q3LFD5 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.86□□□□□ -1.79
USP41Q3LFD5 AC034159.1-201ENST00000513885 583 ntBASIC3.86□□□□□ -1.79
USP41Q3LFD5 AC117532.1-201ENST00000514638 323 ntBASIC3.86□□□□□ -1.79
USP41Q3LFD5 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.86□□□□□ -1.79
USP41Q3LFD5 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.86□□□□□ -1.79
USP41Q3LFD5 AC013828.2-201ENST00000532487 235 ntBASIC3.86□□□□□ -1.79
USP41Q3LFD5 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
USP41Q3LFD5 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.86□□□□□ -1.79
USP41Q3LFD5 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.86□□□□□ -1.79
USP41Q3LFD5 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.86□□□□□ -1.79
USP41Q3LFD5 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.86□□□□□ -1.79
USP41Q3LFD5 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.86□□□□□ -1.79
USP41Q3LFD5 AL358072.1-201ENST00000604156 575 ntBASIC3.86□□□□□ -1.79
USP41Q3LFD5 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.86□□□□□ -1.79
USP41Q3LFD5 MIR7844-201ENST00000616161 122 ntBASIC3.86□□□□□ -1.79
USP41Q3LFD5 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.86□□□□□ -1.79
USP41Q3LFD5 AL355365.1-201ENST00000616480 294 ntBASIC3.86□□□□□ -1.79
USP41Q3LFD5 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.86□□□□□ -1.79
USP41Q3LFD5 AC091953.5-201ENST00000622919 233 ntBASIC3.86□□□□□ -1.79
USP41Q3LFD5 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.86□□□□□ -1.79
USP41Q3LFD5 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.86□□□□□ -1.79
USP41Q3LFD5 AP003399.1-201ENST00000637534 361 ntBASIC3.86□□□□□ -1.79
USP41Q3LFD5 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.86□□□□□ -1.79
USP41Q3LFD5 AC006927.3-201ENST00000638789 384 ntBASIC3.86□□□□□ -1.79
USP41Q3LFD5 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
USP41Q3LFD5 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
USP41Q3LFD5 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.86□□□□□ -1.79
USP41Q3LFD5 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.86□□□□□ -1.79
USP41Q3LFD5 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP41Q3LFD5 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP41Q3LFD5 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
USP41Q3LFD5 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.86□□□□□ -1.79
USP41Q3LFD5 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
USP41Q3LFD5 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USP41Q3LFD5 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.85□□□□□ -1.79
USP41Q3LFD5 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.85□□□□□ -1.79
USP41Q3LFD5 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.85□□□□□ -1.79
USP41Q3LFD5 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
USP41Q3LFD5 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
USP41Q3LFD5 AP001486.2-201ENST00000561652 5113 ntBASIC3.85□□□□□ -1.79
USP41Q3LFD5 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
USP41Q3LFD5 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
USP41Q3LFD5 RNU6-525P-201ENST00000363685 104 ntBASIC3.85□□□□□ -1.79
USP41Q3LFD5 RNU5F-7P-201ENST00000363696 115 ntBASIC3.85□□□□□ -1.79
USP41Q3LFD5 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.85□□□□□ -1.79
USP41Q3LFD5 AL158156.1-201ENST00000422509 473 ntBASIC3.85□□□□□ -1.79
USP41Q3LFD5 AC092832.1-201ENST00000422934 400 ntBASIC3.85□□□□□ -1.79
USP41Q3LFD5 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.85□□□□□ -1.79
USP41Q3LFD5 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.85□□□□□ -1.79
USP41Q3LFD5 MTCYBP45-201ENST00000435243 565 ntBASIC3.85□□□□□ -1.79
USP41Q3LFD5 USP9YP7-201ENST00000436723 430 ntBASIC3.85□□□□□ -1.79
USP41Q3LFD5 LARP1BP3-201ENST00000437229 869 ntBASIC3.85□□□□□ -1.79
USP41Q3LFD5 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.85□□□□□ -1.79
USP41Q3LFD5 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.85□□□□□ -1.79
USP41Q3LFD5 USP9YP32-201ENST00000452432 430 ntBASIC3.85□□□□□ -1.79
USP41Q3LFD5 AC099563.1-201ENST00000456086 418 ntBASIC3.85□□□□□ -1.79
USP41Q3LFD5 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.85□□□□□ -1.79
USP41Q3LFD5 HMGB1P36-201ENST00000487709 576 ntBASIC3.85□□□□□ -1.79
USP41Q3LFD5 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.85□□□□□ -1.79
USP41Q3LFD5 AC026784.1-201ENST00000507986 352 ntBASIC3.85□□□□□ -1.79
USP41Q3LFD5 AC006390.1-201ENST00000508068 283 ntBASIC3.85□□□□□ -1.79
USP41Q3LFD5 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.85□□□□□ -1.79
USP41Q3LFD5 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.85□□□□□ -1.79
USP41Q3LFD5 IGKV2-23-201ENST00000518729 323 ntBASIC3.85□□□□□ -1.79
USP41Q3LFD5 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.85□□□□□ -1.79
USP41Q3LFD5 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.85□□□□□ -1.79
USP41Q3LFD5 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.85□□□□□ -1.79
USP41Q3LFD5 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.85□□□□□ -1.79
USP41Q3LFD5 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USP41Q3LFD5 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.85□□□□□ -1.79
USP41Q3LFD5 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.85□□□□□ -1.79
USP41Q3LFD5 MIR5195-201ENST00000583555 115 ntBASIC3.85□□□□□ -1.79
USP41Q3LFD5 AL031985.2-201ENST00000600955 480 ntBASIC3.85□□□□□ -1.79
USP41Q3LFD5 AC073114.1-201ENST00000612027 490 ntBASIC3.85□□□□□ -1.79
USP41Q3LFD5 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.85□□□□□ -1.79
USP41Q3LFD5 AC091965.5-201ENST00000624785 342 ntBASIC3.85□□□□□ -1.79
USP41Q3LFD5 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USP41Q3LFD5 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.85□□□□□ -1.79
USP41Q3LFD5 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
USP41Q3LFD5 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.85□□□□□ -1.79
USP41Q3LFD5 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
USP41Q3LFD5 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.84□□□□□ -1.79
USP41Q3LFD5 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
USP41Q3LFD5 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
USP41Q3LFD5 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
USP41Q3LFD5 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
USP41Q3LFD5 RNA5SP267-201ENST00000364893 126 ntBASIC3.84□□□□□ -1.79
USP41Q3LFD5 SNORA26.8-201ENST00000391306 124 ntBASIC3.84□□□□□ -1.79
USP41Q3LFD5 NPM1P11-201ENST00000417106 855 ntBASIC3.84□□□□□ -1.79
USP41Q3LFD5 HMGB3P20-201ENST00000417997 600 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms